YALI0D07106g

Overview

Description weakly similar to uniprot|Q8VC10 Mus musculus Hypothetical 52.2 kDa protein
Locus type CDS
Locus tag YALI0D07106g

Location

Species Yarrowia lipolytica Positions 906572..908413
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1842 (nuc.)
Previous locus YALI0D07084g Next locus YALI0D07128g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07106g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07106gYALI0D07106g_mRNA-001YALI0D07106g_CDS-001

Nucleotide sequence

 

>YALI0D07106g
ATGTCTATCAACACGGTAGTCATCGGCTCAGGTCCCGCGGGACTCTGTCTCTCCTACATT
CTGCACGGCAACATACCCTACTACAACCCCCACAAGCCACATCCTGATCCCGAACTCCAC
AGGCTGCTGGCTCAGTATGAGAAGAGGCCGGGAGGCAAGTCGCTGCTGGACGCGGTGTCC
AACCGAGACGTTTTGCAACACGTGATCGACAAGGGTCCGCATTTCCGATCGTCCATGCTG
CCAGTCAACCTGCTTCTGGATCTGCTGGTGGTCTCAGACGAGATCAACTACGTCAGTAGG
GACCAAATGGATAGCCGAATCACGTGGGTGCACGAACCCGAGCGGGCGATTGATCACGTG
GTCATCGGAACCCATCCTGGAGGCCAATGGGCTCAATCTGATACTTCTACAACCACTCCT
GATGACCAATGTTTGAGCTACGCAGAAATGCTGTCTCTCCCAGGCTACCCATTTTCCACG
CATTACAAAGAAAAGTACGGCAATGCACCTCCGGAGTTTTTGCGGCCTCGAAGGAAAGAT
ATAGCGTCGTATTTCGACGCCTACCCCGACATTGTGGGCATCTCAGACTCACTAATTATC
GGAACCGTAATAGAGGTCGATATCAGAAGCAAGGGAGGCTATTCCGTCAGTTACAACGGT
CAGGTTGGTCTTATGACCCCTGGCTCTGAATCTGTTCCTGGATCTCCCTCTGGCCCAAGT
TCGCAAACAGCCTCCTGGGCGTCGCCTAAGAGAAGTCCGTCCTGCCGACTTACTACAACT
AATGTGGTTTTGGCAACCGGCATTTTCGACAAACCGTCACAGTTCAAGACCCACAAACAC
GCAAACTGCTCATCCAAGTCGTTGCTGTACAACTCGGAGTGCACGGGCATGACTCTCAAC
GAGCTGATTGACAAACGGTTCAATGGGCTCTTCCACTTTGACCATTCGGACTCAGATGTC
ACCCTGGTGGTCGGATCTGGCTTCTCTGCTGCCGACATCATCAGTTCGACTTTCAAGCAG
GGCGGAAGAGTGCTTCATTTGTTCAAATGGGGTGACAAACCGTGTCCTTTAAAAGGATTC
CCTAGAGAGCTGTACCCCGAGTACGCTTCTATTTACAGATGGATGAGGCTGGCAGCTGCA
ACTCAGAAAAGGTCTGCTAGCGGTGCTCAACCAACTAATGGGGTTGTTTCAACGTCTCGA
AAATGTAAGTTTGAAGAAAACGGATGCCACTACGAGGGACTGGCAAACACAAAGATTCTA
TCTGCTGAAGACGGAGTTCTCAAACTAGAACTTCCCGGCGGAGAGGTTCTGACTCGACAC
GTAGGAGGCGTGCGCATTTGTGTCGGTCGAACCGGGTCTCTGCAGTTTCTATCAAACCGC
ATCCTGCATGCCCTAGACCTCGCTCAACAGGAGGCCTACACGGTGAACAAGCATACGATT
TCCAAGCGCATTCTCAACCCGAGGAAAGACAAGGGAGACCCATCAAACGGTCTCTCAGAC
CTCGGACACAAGCACACAAACCGACCTGTGTCCAACGGTGATCCAAAGACCCCCGACTCG
GCAGGCGCCTCTCCATGCACCTACGTGGCTGCGGGAGCTCCAGGCGACGCCCAGTCGTGC
GAGGCCATGGATAATGCCTTCTACGGCGACTTTCAGGTGCTTCCCAACATGTACGCCATT
GGCAGCCTCGCGGGAGATTCTCTCGTGCGGTTTGTGCTTGGAGGAGCTGCTGCTGTGGGC
AAGTTGTTGGGCGTCTAGCAAGGAGGTATCAACCATCAACCAACTATCGGTCACTGCAGT
TGACCAAGTATTTATTTGTAACATAACTGACGCATTGAGCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07106g_CDS-001

Protein length: 586 aa.
Product: Conserved hypothetical protein

>YALI0D07106g_CDS-001 MSINTVVIGSGPAGLCLSYILHGNIPYYNPHKPHPDPELHRLLAQYEKRPGGKSLLDAVS
NRDVLQHVIDKGPHFRSSMLPVNLLLDLLVVSDEINYVSRDQMDSRITWVHEPERAIDHV
VIGTHPGGQWAQSDTSTTTPDDQCLSYAEMLSLPGYPFSTHYKEKYGNAPPEFLRPRRKD
IASYFDAYPDIVGISDSLIIGTVIEVDIRSKGGYSVSYNGQVGLMTPGSESVPGSPSGPS
SQTASWASPKRSPSCRLTTTNVVLATGIFDKPSQFKTHKHANCSSKSLLYNSECTGMTLN
ELIDKRFNGLFHFDHSDSDVTLVVGSGFSAADIISSTFKQGGRVLHLFKWGDKPCPLKGF
PRELYPEYASIYRWMRLAAATQKRSASGAQPTNGVVSTSRKCKFEENGCHYEGLANTKIL
SAEDGVLKLELPGGEVLTRHVGGVRICVGRTGSLQFLSNRILHALDLAQQEAYTVNKHTI
SKRILNPRKDKGDPSNGLSDLGHKHTNRPVSNGDPKTPDSAGASPCTYVAAGAPGDAQSC
EAMDNAFYGDFQVLPNMYAIGSLAGDSLVRFVLGGAAAVGKLLGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG