YALI0D07040g

Overview

Description weakly similar to uniprot|Q12511 Saccharomyces cerevisiae YOR090c PTC5 putative 2C protein phosphatase (PP2Cs)
Locus type CDS
Locus tag YALI0D07040g

Location

Species Yarrowia lipolytica Positions 900178..902041
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1864 (nuc.)
Previous locus YALI0D07018g Next locus YALI0D07062g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07040g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07040gYALI0D07040g_mRNA-001YALI0D07040g_CDS-001

Nucleotide sequence

 

>YALI0D07040g
ATGACAGAGAGACTCTGTACAATTGCGGCCTTGCTGAACCCGAATGTATATCCCTTTTGC
CTGAGCAATTCTTCCGTGATATTTAGTCCAGGCGAGGTTCCCTACGATGTCCTTGCATCC
ACTGAGCTAAACCCATTAATACAGTACACCCGCAGTGCTGAACCTCCTACTGTGTCTGTT
AACATGCTACGAAGTTCCAAACGATACATGACTACCATGTCCAACCGACAACCTGTGGCC
TCTCGACGGGCTCTCTACGGCCTGGCCTCCGGGCTCGTGCTCGCCACCGCATACATGGGC
CACCAGTATCTTATGGACCCCATTGCTCTGGACAGCAGAGGTATCAACACCAATGCTGCT
GGAGGGTACGATCCGTTTGGCCGACGAATGAACATTATGAATCCCGAGCGGGTCAACGCG
CGACTGCGGGAGCATGAGCAGAGTCATTTCGTGGAGCGAGGACGCGGGGTACTGAGATAC
GATATGGCGCAGTTGCCGTCCAATTCGCCCATTGAGGACGACTACTCCGACCGGGTGGTG
TCTGTGGCTCTGAATGAAGCTGGAAACGCCAACGCTTCGTCCGACTGGATGTTCTGGGGC
CTGTATGACGGCCATGGAGGCTGGACCACCTCTGCCAAGCTCAGAGAAGAGCTCATCAAC
TATGTGATTCGACAGCTTGATGCGGGCTACAGCGATGCTGGCAAGACGCTTGGCGATAAC
ATACGACGAACTCCCAGCCCTGAAACCATCGATCTGGCTATCAAGAGAGGCTTCCTGGCT
CTGGATGACGAGATCTGCATCCACTCCATTAACAGACTGCTCAAGAACCCCCAAAAGGGC
CAGTCTCCCGAGACGCTGGCTCCCGCCGTTTCTGGATCCTGTGGTCTGCTGGCATTCTAT
GATACCCTGTCTCACACTCTTCGAGTTGCTGTCACCGGCGATTCTCGTGCTGTTCTCGGC
TCCAAGTCTTCTTCTGGATGGACTGCACGTGCCCTGTCTGTCGACCAGACTGGCTCCAAC
CAGCGAGAAGCTGACCGAATCCGAAAAGAGCATCCTGGCGAAGAGGACCGTGTGATTCGA
CGGGGCCGAGTTCTGGGCGGTCTGGAACCCACCCGAGCGTTTGGAGACGCCCGATACAAG
TGGACACGTGACTTGCAAGATAAGGTGGCACGTGCCTTTTTCGGCCGAAGCACGCCTCCG
GAGCTGAGGTCGCCTCCCTACGTCACAGCTGAGCCTGAGGTGACTACCACCAAGGTCAAG
AGTGGTGACTTTCTGGTGATGGGCTCCGATGGGTTGTTCGAGATGCTCTCCAACGACGAG
GTGGTGTCTCTGGTCGTGCAGTGGATGGAGACTCACCCCATCACCGAGTCTTCCACCGCC
GCTTCGGCCAAGTCTGGAGGAATGTGGGACAAGATGTTTGGCAGCAAGGACTCGACAAAG
GTGGTTGATCTGACAGTCGACCAGGACGCCATGAAGCCTCCTTTCCGACACCAGGGTGCC
GTTCTCAAGCCCACTGTTGAGGATGAGAACGTGGCAACTCACCTGATTCGAAACGCTCTT
GGAGGAGCCGATCGGGAACAGCTGTCCATGCTTCTGAGCATCCCTGCTCCTCAGTCACGG
CGATACCGAGACGACCTGACCGTGACGGTGGTTTTCTTTGGCGATGAGAAGGCTCCTGAG
AACGGCGGTATCAGAGGCAATGTTGCTGCTACCAGTGGAGGTGTGGGCACTCAAGAAAAG
GCAAAGTTGTAAGAGCAGATGACGAAACCGCAGGCTGAGCGTCTGCAAGAGGCAGTCAGA
CACTTGCTTTTCGTGCGACGAGTACATACATCTCTAGTAATATATGTTGGGTTACGTTAT
GTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07040g_CDS-001

Protein length: 584 aa.
Product: Conserved hypothetical protein

>YALI0D07040g_CDS-001 MTERLCTIAALLNPNVYPFCLSNSSVIFSPGEVPYDVLASTELNPLIQYTRSAEPPTVSV
NMLRSSKRYMTTMSNRQPVASRRALYGLASGLVLATAYMGHQYLMDPIALDSRGINTNAA
GGYDPFGRRMNIMNPERVNARLREHEQSHFVERGRGVLRYDMAQLPSNSPIEDDYSDRVV
SVALNEAGNANASSDWMFWGLYDGHGGWTTSAKLREELINYVIRQLDAGYSDAGKTLGDN
IRRTPSPETIDLAIKRGFLALDDEICIHSINRLLKNPQKGQSPETLAPAVSGSCGLLAFY
DTLSHTLRVAVTGDSRAVLGSKSSSGWTARALSVDQTGSNQREADRIRKEHPGEEDRVIR
RGRVLGGLEPTRAFGDARYKWTRDLQDKVARAFFGRSTPPELRSPPYVTAEPEVTTTKVK
SGDFLVMGSDGLFEMLSNDEVVSLVVQWMETHPITESSTAASAKSGGMWDKMFGSKDSTK
VVDLTVDQDAMKPPFRHQGAVLKPTVEDENVATHLIRNALGGADREQLSMLLSIPAPQSR
RYRDDLTVTVVFFGDEKAPENGGIRGNVAATSGGVGTQEKAKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG