YALI0D06996g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D06996g

Location

Species Yarrowia lipolytica Positions 895543..896947
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1405 (nuc.)
Previous locus YALI0D06974g Next locus YALI0D07018g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06996g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06996gYALI0D06996g_mRNA-001YALI0D06996g_CDS-001

Nucleotide sequence

 

>YALI0D06996g
ATGCTGCTCCTGAACATGCTCTCTCTGCTGCCTGTGGCGCTCGCCTACAACACGTTCCAG
AACGCGGCCATCGTCGACCCCGCGACCTTCTCAGCCACCACTGAGGACGGGCAGGTTCTG
CTCATCGACACGTACAACTTCAAGACGTGGTCGATGGACGACCGACAGTACGTGGGCCAG
TGGAACCCCTTCGACAAGCTGCGAACTAGAGCCAACGACACGGGAATGGTGATGCTGTCG
CATTTCCGAGACGAGTCCGGCAACTTTGTGGGCTCTTACGACGACAAGACCGGCGAAATC
ACCAACTCGGGCCGAGTTGTGGGCCATGCCAACGACACGGGCTTCTTCGACGTGACCGGA
ACCCGACGAGGACTGGCCAAGGACAACTCCACCCGCCAGTTCTATGCACCGGACCAGTCG
TTCATTGGCGGCGTGTTTGTGGAGCCCAAGGTCGGCCCTGGCTCCAGCGGATTCACCTGG
GACGACCTCAACAAGGACTACAAGGATATCGCAGCTACCATTGGCCCCCAGGCTGGAATT
GTGCGAGATCTGAGCGGCCTTCTCTCCCCTCGAACTCGATTCTACATTCGTAATCCCCAG
TTTGGAGATGGAGCCGAAATGGTTTACATTCGAAACAACACTATGGATACCCTGCAGATC
GAAACCGACTACACCATCCAACTCAACCTGTCGCATATTAGCTTCAACTACACTCTGAAC
GTGAACACGGGCAAGTTTGACTTTGGACCCGATGGAGAGGCCTTCATCCAGTACTCCAAC
AGCTCTGTGGTTGCCGACGGAGAGCTTTGGGGCGACTTCCTGAAACAGACCGGGGTTGGA
AACGAAACCAAGACCATTAAGTCTGATCTGGACCTGTCTCCTATTGCTAATCTGTCCTTT
GTCGACTCGGACCAGAAACCCATTGGAGGAGTATATAACCTGGACGTGATCCTTGATACA
AACAACAACCTGATGTACGCCATCAACCCTAACACTATGGTGGTTTCCGACGCTTCTGGT
AAAGCTGTGGGATCCTTGAACGTGACAGATTACTCCCTTCTGTCTAACGACAACAAGACT
GTTCTTGGGCAGATTGTTCTGAAGCACGACAAGATTGATAACGATACTGTTCTCGACAAC
CCTGCTCCTGCTTCGTCCACCGCCGCCAATGGAGCTGGATCTACTCTTCCCACTGCCGCT
GCCGCCTTGGTCATTCCATTCTTTTTGCTAATGGTGTAAGAGAGGCATATGGCAGACTGC
AAGCAACCCTCGTCGGCGTGACTATTCCCACTGACCCGGACCCCAAAAAAAATTTGTCTA
ACGAGACATCAAGCACATACCATTGTACATTCCCCTATTTATATTTTGTACCTATAATCA
TTGAATATAATTGTATATATCTGCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06996g_CDS-001

Protein length: 413 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D06996g_CDS-001 MLLLNMLSLLPVALAYNTFQNAAIVDPATFSATTEDGQVLLIDTYNFKTWSMDDRQYVGQ
WNPFDKLRTRANDTGMVMLSHFRDESGNFVGSYDDKTGEITNSGRVVGHANDTGFFDVTG
TRRGLAKDNSTRQFYAPDQSFIGGVFVEPKVGPGSSGFTWDDLNKDYKDIAATIGPQAGI
VRDLSGLLSPRTRFYIRNPQFGDGAEMVYIRNNTMDTLQIETDYTIQLNLSHISFNYTLN
VNTGKFDFGPDGEAFIQYSNSSVVADGELWGDFLKQTGVGNETKTIKSDLDLSPIANLSF
VDSDQKPIGGVYNLDVILDTNNNLMYAINPNTMVVSDASGKAVGSLNVTDYSLLSNDNKT
VLGQIVLKHDKIDNDTVLDNPAPASSTAANGAGSTLPTAAAALVIPFFLLMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG