YALI0D06952g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D06952g

Location

Species Yarrowia lipolytica Positions 890763..893147
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2385 (nuc.)
Previous locus YALI0D06930g Next locus YALI0D06974g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06952g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06952gYALI0D06952g_mRNA-001YALI0D06952g_CDS-001

Nucleotide sequence

 

>YALI0D06952g
ATGGTTGTGTGTAAAACTGAGCTTGAGACCCACAGCGAGAGTATTCTTTCTTCTAATTTA
TTTTTCAGCCCGCACCACGCAGTCGAATTTCGGTCGTTGACGGCTCTGCAAAACGACACA
GACGACGCTATAGACGTAGGTCCCAGCTCCATCGATCACACCACTTTGCATTCGATTGCC
GTGACACGACCCAACGATCCAAGAGACCAGCCCCAGCGCACAATGACTGCCCGAGTCACC
AAACGAAAAACACGCCGGTCCACCAAAGGGTGCACCGTCTGTCTGCAGCGCAAGAAGAAA
TGCGACGAAACCTGGCCCGTGTGCAACTCGTGCGAGCGGTTGGGCCACGAGTGCAAGTGG
CGCGATAAGATCCGGTTTCGAAAACCCGACGTTTTTTCGCCCGACGTGCTGGCCAAGTAC
TGCTTCGAGGAGGATAACCGCATGGGTGGCGAGTTTGAATTCATCACGCTCAATGCAGAC
AATATCCACAAGCTCAAACTGGACGAAGACGACAGCTCAGACAACTCTCCCGAGGTGTTC
AACACCAACTACTTTGGCGAGAACCGCAAGTCCAGTGTCAGTTCTTCTGACAGCATTCAC
GATGTGACCAAGACAGCTGCTCTGGCCGAAGTCATGGTAGACTTTGTTTCTGACGCACCT
GCCATCATCACCGAAATCCCCAACCATGCAAGTGCTCACTCCTCCATCTCTCAAAGGGCT
CTGGCCTGTGCCCCGTCGCCTAGTCTGTCCGATTGGGTCAAGGAGTCGTACGACCCGTTC
CATTTCGGCTTCTCCTTCAACCAGGGCGAGTTTGAGGAGCTCGGGGATATGGGCGGTTAC
GTGGAGGAGATTGAAGATAAGAACGTGGCCAAGGACGTGGCCAAGGACGCGGCCAATGAC
GCGACCAAGGACATGATCAAGTCCAATTCCACCAAAAGCAAAGACGAACTCAACTCCCGG
GCTCTGGAGAAACTGTCTCTCACTCTGCAAATCCCCAAGAACATTGACGTTCTTACTTAC
CTTGCTGGAGGCCAGGATGACGCGGTGGCTACAGAACGACAACTTTGGAACCAGTGGCTG
AGCATTTCCGTGCCCACTAATTCCGTTACTCCCTCCGACAAGTCAGCTCTGTTGGTGGTC
CTTCTCCCTCTCTCCATCTCCTCCTCAGCTGTCCGTTCAGCCATTCTCGCCTGGACTTGC
ACCCAAATGTACAACCTGTGCCGAATCCAGGAGTCTGTGGTGCAGAAGTTTTGCGACGAC
AAAGAACGCACCAATCTACTCGTGGCAGCAACGCGACAACCTCCGCAGTGGAGAACTCAG
GCCGATATCGACGCTCTGTTTGCTGCCACTCTCATCTGGTGCGCTGTGGAGTCCACGACC
GGAGGCACCTCCTGGATCAACTACATGAAGGCCTCCTCGGAGCTGATCCGTTCCCAGGGC
GGCGAAATTGCGTTCCTGCGCAAGAACAAGACCAAAACACGTGCCTGGCTCCTCAGAAAC
TTCCTCTACCACGACGTGATTGCTTCATTGTCCATTGGTATCTTCCCCCTGTGTCAGGAA
GGAGCTGCTTTTTGCTACACAAAGGTGTCTAGTAAAAAGACCCATCTTTCCGATGAGGAG
ACTGAGACACGGGAATTTCTGCTCTCTAAGGGCGTCAATGAGCTGGACTCGCTGATCGGA
AGATGCCACAACATTTTTTACATTCTCTGGCGAATCGGAGGCCTGTCTCACGAGCGAATC
TGTTTTGCCGAAAGCGCTCTGGCTCTCTGCGACGGGTTGCTGCGACAAGTGGACGAATCG
GAAATGATTGACGAAGAAGGACTCGATGAAAACGAAAGAGAGCCCGCCATTCTGATGCAC
AATCTTTATCACCGAACTGCAGTCATCTGTCTTTATGTGGCTGCCCAGCGACTCAAACAG
AACTTTGCGGCCCATTACCATCCCGATTTCGACGCCATCATTCCGGAATCTCAAGTTCTG
GCCTCCGTAGAGTACATTATCGGCGTTTCGGAGACGCTGCAGCCCGGAGAACCCCCAGAG
TCGTGCATCACTTTCCCTCTGTTTGTGGCAGGCTGTGTGGCTTCGGATAAAGACACTGTG
GATAGAGTGAACACTCGACTTAAGAAGCGGCTATCGGAGATCGGATACGCCAATGGAGTG
ACTGCGGCAACCATTGTCGAGATGATCTGGCAGCAGAGATGCGGTCTGTTCATGAACGGA
CAGCTGGACTCCATCTCGCAATGGAGCAGTAACCTGGACTGGGTTAATGTGATTCGAAGG
ACGGGCATTACGCCGCTGTTGTCGTAATTCTGGTCGCTTCTATGGCATTTATTTATTGAC
TGATTAACAAAAATATGAACTGTGAGTACATTCATGACTATTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06952g_CDS-001

Protein length: 769 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D06952g_CDS-001 MVVCKTELETHSESILSSNLFFSPHHAVEFRSLTALQNDTDDAIDVGPSSIDHTTLHSIA
VTRPNDPRDQPQRTMTARVTKRKTRRSTKGCTVCLQRKKKCDETWPVCNSCERLGHECKW
RDKIRFRKPDVFSPDVLAKYCFEEDNRMGGEFEFITLNADNIHKLKLDEDDSSDNSPEVF
NTNYFGENRKSSVSSSDSIHDVTKTAALAEVMVDFVSDAPAIITEIPNHASAHSSISQRA
LACAPSPSLSDWVKESYDPFHFGFSFNQGEFEELGDMGGYVEEIEDKNVAKDVAKDAAND
ATKDMIKSNSTKSKDELNSRALEKLSLTLQIPKNIDVLTYLAGGQDDAVATERQLWNQWL
SISVPTNSVTPSDKSALLVVLLPLSISSSAVRSAILAWTCTQMYNLCRIQESVVQKFCDD
KERTNLLVAATRQPPQWRTQADIDALFAATLIWCAVESTTGGTSWINYMKASSELIRSQG
GEIAFLRKNKTKTRAWLLRNFLYHDVIASLSIGIFPLCQEGAAFCYTKVSSKKTHLSDEE
TETREFLLSKGVNELDSLIGRCHNIFYILWRIGGLSHERICFAESALALCDGLLRQVDES
EMIDEEGLDENEREPAILMHNLYHRTAVICLYVAAQRLKQNFAAHYHPDFDAIIPESQVL
ASVEYIIGVSETLQPGEPPESCITFPLFVAGCVASDKDTVDRVNTRLKKRLSEIGYANGV
TAATIVEMIWQQRCGLFMNGQLDSISQWSSNLDWVNVIRRTGITPLLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG