YALI0D06886g

Overview

Description some similarities with uniprot|P41800 Saccharomyces cerevisiae YLL006w MMM1 required for mitochondrial shape and structure
Locus type CDS
Locus tag YALI0D06886g

Location

Species Yarrowia lipolytica Positions 882448..884013
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1566 (nuc.)
Previous locus YALI0D06864g Next locus YALI0D06908g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06886g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06886gYALI0D06886g_mRNA-001YALI0D06886g_CDS-001

Nucleotide sequence

 

>YALI0D06886g
ATGGTGATCCCCGCAGAGCTGATTCAGAAGGCTCTCAAACAACAGTCTGGCTGGGGCTTC
ACCGAGGGGCTGGTTCTGGGCCAACTGTCAGTCATTATCACAGTCATTATCATTCTCAAG
TTTGTCATTTTTGCCGAGAACAAGAGCCCGAAAAAAGGTAATGACATGACCGCTGTGTCG
GCCAAGGACAAGGAGGCCGAGCATGTGGCCATGGGTGGTCAGACAGCCAATGGAGTCAAG
ACCAGTGGCGTAAGACGCAACAAGTCGTCCACCAACCTGCGAAACAGACTGGCTACGGGG
GCTGCTGGGGCCTCTATTTCGCGCCCTGGAAGCAGCCGGGTGTCCATGGTGAGGTCTACT
TCGGGAGCGGTACCTGTGTTGGGCCAAAATGGAGGTGCTACACCGAGGGGTATGGCAGGC
AGCAGTGTTGCTGGTAGCACCTCCAACCTTGCCGTCCCAGTACCTACTACACCCACAATT
GCCGAGGGAATCGAGCCGGAAAATGACTCCACCCTTCAAGACGATTCCGCTATCATCGAT
CTCGATCTCGATCTCGATCTATCCCCTGTAGATGAGATTCTGCACAAGACCTGCTACCAG
CTGTCGTCTCACGCGCCAGAGTCGCTCGACTGGTTCAACGTGTTGGTGGCCCAGATTATC
ACCCAGCTGCGGTTCGATGCCAAGGCGAACAACAACCTGAATCTGCTCAATTCGCTCGAT
GCAGCCTTCAACTCCAAACGTCCAGACTTCATCGACAGAATCAACGTGACGGAAATCAAC
CTCGGCGACGATTACCCCATCTTGTCCAACTGCAAAATCACCCACAAAGGCACAGGGCCC
GCAGGATCCGGAGCTGCGTCAGGAAACAACATGCCCAACAATGCCGAGTACGACGACTCG
CGCTTGGAAGCTCAAATGGATATCGATCTTTCAGATACAATTACGCTGGGAATTGAAACG
AGACTGAATCTCAACCAGCCCAAGATCCTGTCGCCCTTTTTGTCGCTGTCGACTTCTCTG
CCAGTTTCCCTTTCCGTCACTATTGTCCGGTTCACAGCCCGTCTGAACATCTCTCTTTAC
CAACAGATCGAACAGACTGAAGAAGACGAAAAGGACAAGCGAGACACTATTCTGTCCATC
AACTTTGAGCCGGATTACAAGCTGCAGCTGTCGGTCAAGTCGCTGGTGGGGTCTCGTTCG
CGTCTACAGAACGTGCCGACTCTGGAGTCACTGGTAGATTCCAAGATCCAGAAATGGTTC
CGAGATCACTACGTCGAGCCTCATCAAATGATCTTTATTCTGCCCAGTCTCTGGCCGAGA
AAGAAACGGTCTGCTACAGCGGGAGCAGCAGGGACAGCCACTGGAGCAGATACGGCTTCT
GGCTCGTCATAAGGAATAGCTCACTCTGCAGAAAGTAGCTCTATGAATTCGACACGGTAG
CAATCAGACGCTGTGGACCCTAACTTTTCAGCAGATAGACATCGGAATAGCCACCAAGCA
ACTTCAGAGACCGGTTACTTGCCACAGACAGTACATAGCATTATTTATATTAACATTTAT
TCCCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06886g_CDS-001

Protein length: 464 aa.
Product: Conserved hypothetical protein

>YALI0D06886g_CDS-001 MVIPAELIQKALKQQSGWGFTEGLVLGQLSVIITVIIILKFVIFAENKSPKKGNDMTAVS
AKDKEAEHVAMGGQTANGVKTSGVRRNKSSTNLRNRLATGAAGASISRPGSSRVSMVRST
SGAVPVLGQNGGATPRGMAGSSVAGSTSNLAVPVPTTPTIAEGIEPENDSTLQDDSAIID
LDLDLDLSPVDEILHKTCYQLSSHAPESLDWFNVLVAQIITQLRFDAKANNNLNLLNSLD
AAFNSKRPDFIDRINVTEINLGDDYPILSNCKITHKGTGPAGSGAASGNNMPNNAEYDDS
RLEAQMDIDLSDTITLGIETRLNLNQPKILSPFLSLSTSLPVSLSVTIVRFTARLNISLY
QQIEQTEEDEKDKRDTILSINFEPDYKLQLSVKSLVGSRSRLQNVPTLESLVDSKIQKWF
RDHYVEPHQMIFILPSLWPRKKRSATAGAAGTATGADTASGSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG