YALI0D06633g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D06633g

Location

Species Yarrowia lipolytica Positions 844817..845836
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1020 (nuc.)
Previous locus YALI0D06611g Next locus YALI0D06655g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06633g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06633gYALI0D06633g_mRNA-001YALI0D06633g_CDS-001

Nucleotide sequence

 

>YALI0D06633g
ATGAAGTTCTCCACCACCACTCTGGCTCTACTTTCGGCTCTAGTTGCCGCCGACTTTGAC
CCTAACCAGCCCTTTGGTCTGCAGGCCATCAAGGACGGCTCCGACATTGACTTTGCGTCG
CTATCCATCGTCAACGGCGCCCTCTATATCAACAACAAGGGCTCTTTTTTCCAGCTCAAA
GATGGAGCCATTGCCAGTGCCACGGGCCAGAAACTCGACTTTAGCAAGCAGGGTCCGGTC
AAGACGGACGACTCCGGCTCTCAGGTGAAAATCAACTCCGACTATTCGGTCGAAATCGAC
GGCAAAAAGCTCAAGGCGTGCTCGTACCAGGTCGGCTGGGCGGTTGAGGTCGATTCGGAC
TGCCAGGGCGGCCAGGAGTTCCAATTACGAGCTGTTCAGGCGGGTTCGAGTCAGGGAGAG
GGAGACGGCCAGTCTCAGGATCAGTCTCAGGATCAGACACAGGATCAGACTCAGTCTCAG
TCTCAGTCTCAGTCTCAGTCTCAGTCTCAGTCTCAGTCTCAGCCTTCTGCCACAGGTAGT
TCTGGCGACGGATCCGACAGTTCAGGCTCTGGCTCTGGCTCTGACTCTGGCTCTGGCGCT
GGCTCTGGCTCTGGCTCTCCTTCAGACCCTTCTTCCGTCTCTTCTCCTCAGCAATCTCCT
TCAGCTGGAGACTCGGGTTCTGGCTCAGGTTCGGGCTCGGGAACTGCTGCTGGCATTGGA
GCTGCTGGAGCTGCTGGAGCTGGTTCAGGCTCGGGTTCTGGTTCTGGTCCTGGTTCTGGT
TCTGGGTCAAACGGCTCTGGAACCGGCTCCTCCCACCCCTGCGCCCAATGCCCCGGATGG
AACGGACAGCCTCCTCAGAGCGGAGGAGCAAACGGCGGAAACGCCAGCCCCGGCAACCCC
AACAATGGCAACGCCAACAGTACCTCAAACACCCCTCCCGCTCAGGCCAACCCGGCTTCT
GTCAAGTCCACAGCCTCAGGTCTTGTTGCTGCTGCCCTCGCCCTTTGTCTTCTTTTCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06633g_CDS-001

Protein length: 340 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D06633g_CDS-001 MKFSTTTLALLSALVAADFDPNQPFGLQAIKDGSDIDFASLSIVNGALYINNKGSFFQLK
DGAIASATGQKLDFSKQGPVKTDDSGSQVKINSDYSVEIDGKKLKACSYQVGWAVEVDSD
CQGGQEFQLRAVQAGSSQGEGDGQSQDQSQDQTQDQTQSQSQSQSQSQSQSQSQPSATGS
SGDGSDSSGSGSGSDSGSGAGSGSGSPSDPSSVSSPQQSPSAGDSGSGSGSGSGTAAGIG
AAGAAGAGSGSGSGSGPGSGSGSNGSGTGSSHPCAQCPGWNGQPPQSGGANGGNASPGNP
NNGNANSTSNTPPAQANPASVKSTASGLVAAALALCLLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG