YALI0D06413g

Overview

Description similar to uniprot|Q12271 Saccharomyces cerevisiae YOR109W (ohnolog of YNL106C) INP53 phosphatidylinositol phosphate phosphatase
Locus type CDS
Locus tag YALI0D06413g

Location

Species Yarrowia lipolytica Positions 820338..823615
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3278 (nuc.)
Previous locus YALI0D06405r Next locus YALI0D06435g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06413g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06413gYALI0D06413g_mRNA-001YALI0D06413g_CDS-001

Nucleotide sequence

 

>YALI0D06413g
ATGAAAGTCTACGTGTACGAAAACCCTCGTTCGCTGGCGCTGGTGTCGGAGAAGTATGCG
CTGGTGTTCCGGTATGCGACGCCGACCGACGACAAGAACCGGCCCCGGTGCATTGTGGAG
TTTGCGCCGATTGAGAAGATTGATTTCCGCAAGCACCGGGCGCTGTCGCCGCTCGATTGC
CACGGATTTTTGGGTCTCATCAACATTTCAAGCGACGTCTTTTTGTGTGTGATCACCGCC
AAGTCGCTGGTGGCTTCTCCTCGGCCTGGAGAAACCATCAACCGGGTGGTGGGTGTGGAG
TTCCATTGTCTCAACAGAAACACTTGGGACTTTGTGACGCTGGACCTCAACGGTTATCCT
ATTGATTTGCACGACCAGGCCAGCAGTTCTGGCATCACCGAGCACCCCTGCACACAGCTT
CGAAAGATGCTCACCAACTCATCCTTCTACTACTCGACGGACTTTGATCTCACGTCGTCC
ATGCAGACCCGAGGCACTGCCCAGCCCGCCAGCATGCGCAATCCCGCCGGTCAGGTCATT
TCAACCCTCGAGTCGTCCGACGCCTCCTTCCTGTGGAACTCGTACATGATGACGGAGCTC
GTCAAGTTCAGAGACAACTTGCCCGACTTTGAACGCAGCGAGTTGGACAAGTGCGGCTTT
TTGACCACACTGATCCGGGGCTTTGCCGAAACGGTCAACACGCGGATCGGTAACTACGAC
GAGAACCCCATCTCGTGCCGACTCACCATTGTGTCCAAACAATCATGTCGAATGGCCGGT
ACCCGGTTTCTGGCCAGAGGTATCGATGATGACGGCTTTGTCGCCAACTTTGTCGAGACA
GAAACGATCCTGTACACAGAACGAGGCCAGGCGCAGATTGTGTGCGCATTTCTGCAGGTG
CGAGGCTCGGTGCCTTTCTTCTGGGAACAGGACTCCCAGCTGCTCAGCAACAAGGTGCAG
ATCACCCGGTCCATTGACGCGGCACAGCCGGCATTCGAGCGACATATGGACTACCTGTGT
AACAAGTATGGCTCCATCCACGTGGTCAACCTGCTCTCTCGTGAAAAGTCGCACGAAAAC
GAACTCACCCAGCGATACCATGGCCATATCAAGAAGCTCAACGAGGCAGGAGGCTCGCAT
TCCACCGACCCTGCTTCTGGATCGTCTCGAGGAGGTCTTGTGGCCGTGACCGACTTTGAT
TTTCACCACGAAGTCTCTAAGCAGGGCTACTCTGCTGCTACTCGTGTTCTCAACCGGGTC
ATTGACGCCATGGAGGAGTACGGCTTTTACTCTGCCGACTCTTCCAGTCCCAATGTGACT
CTCCAGAACGGTGTTTTCCGAACAAACTGTCTGGACTGTCTGGATCGAACCAACATGATC
CAGCAGGTTATTTCTCGTCAGGCCCTTCAGATCTTCCTGGATCGAAACCATCTCGGCTGC
AACCCCGATTTTTGGAGCAAACATAACATCTTGTGGGCCGATAACGGCGATCAGCTGTCC
CAGATTTACGCTGGAACCAACGCTCTCAAAACCAGTTACACTCGGTCCGGAAAGATGAAC
CTGGCTGGAGCTCTGGCCGATGTGACAAAATCCGTGGGACGTCTGTACATCAACAACTTC
ACCGACAAGACGAAACAGAACACCACGGACGTTCTTCTCGGCCGACTCTCGGACCAGGAG
GGAATTCTCTTGTACGACCCAATCAACGATTTTGTGGTCAAGGAGCTGGAGCGCCGAAAA
CTCGAGTTCTCGTCCACCACCAACATCAAGGTATTTGCTGGCACCTTCAATCTCAACGGC
GAGCTGTCTGATGCCGATCTCGCGGGCTGGTTCTTCCCTCCCAAGTCTGCGAAGGAGCTT
TCTGGGGGCGCAGGTTTTGATGTGCATGACGACTTGCCCTCCATTGTGCTCGTGGGCTTT
CAAGAAATCGTCCAGCTGACGCCCGGACAGATTCTGAATGCGGATCCGGGCAAAAAGGAG
TTCTGGGAGAAGCGTGTGGAGGCTGTTCTCAACACGCGCGACGAGTACGTGCTTCTGCGG
TCTCACCAGCTGGTGGGAACTGCTCTGTTGCTGTTTGTAAGAAAGGCCGAAGTTGGCTTT
GTCAAGAACATTGAGGGAGCTATCAAGAAGACTGGTCTTGGAGGTATGGCCGGAAACAAG
GGAGGAGTGGCTGTGTCGTTTTCATACGCCAACACCCGGTTCTGCTTTATTACCGCGCAT
CTTGCAGCCGGTACTTCCAACATTGAAGAGCGTCATCACGATTTCAAGACGCTCAATACC
GGTCTGCGGTTCTCGAGAGGTCTCACAATCAAGGACCACGACTGTGTTATTTGGTTGGGA
GACTTCAACTACCGAATTGATATGGATGGAGATGTGGTGCGTCAGATTGTGGCCAAAAAG
GAATATGGTCTGCTGTTTGAACACGATCAGCTCAACAGACAGATGGTGCTTGGAGAAACG
TTCCCTTACTACAACGAGATGGAGATCAACTTCCCCCCTACGTACAAGTTTGACAACGGA
ACAGCCACCTACGACACCTCTGAGAAGTTCAGAACTCCTTCGTGGACTGACCGAGTGCTG
TACAAGGGCACTGGTCTGCGGGGCATCAACTACGGTTGTGTTTCAGACCTGCTGTTCTCG
GACCATAGACCCGTCTACGCCGAGTTCAACGCCCAGATTCTCATTGTTGACCAGAAACGA
AAAGCCGCACTTGGAAAGGAGCTGTACGACAAGCGTCGAAGCGAAATGGGCGGCTCCAAC
GATCTCATTTCGCTGTCTGATCTCAACGAGGTTACCCTCACCCACGGTCTGCCTCCTCCC
TCTACTGACGCGCGAAAGTGGTGGATCAGTGGAGGCCAGACTGCCAAGGTTCCCATTGTT
CCCCCCGCCAAGGGCATGATTCTCAACCCCAAGAAAATCAACCCGTTCGAGGGCGATCTG
CCCGACTTCGTCGACAAGCCTGCTCTTCCCCCGCGACGAAAACCCATTGGAAGTCCGCCC
GTGAAACCGATGCCCAAACCCAAGCCTTCGTCTCTTCGCTCGGCCTCTGCTGTCAGCGCC
ACTGCTCCCCAGCTCCCCATTCCGGAGCTGTCGCAAACCTCTCTGCTAGACATGCCCATT
GGCCCCATTGAGAGCCAGAGCAGCGCAGGACAGAGCAGCAGCACCGAGAAGAGTTTGCTT
GACTAGATGGACTACGAGTGCCTAGAGCACTCCCAAGTATTCTCACTATAGACGTTACAA
ATAATGATTGATGAGCCGGACCCGGACGGGGCATATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06413g_CDS-001

Protein length: 1062 aa.
Product: Polyphosphatidylinositol phosphatase, putative

>YALI0D06413g_CDS-001 MKVYVYENPRSLALVSEKYALVFRYATPTDDKNRPRCIVEFAPIEKIDFRKHRALSPLDC
HGFLGLINISSDVFLCVITAKSLVASPRPGETINRVVGVEFHCLNRNTWDFVTLDLNGYP
IDLHDQASSSGITEHPCTQLRKMLTNSSFYYSTDFDLTSSMQTRGTAQPASMRNPAGQVI
STLESSDASFLWNSYMMTELVKFRDNLPDFERSELDKCGFLTTLIRGFAETVNTRIGNYD
ENPISCRLTIVSKQSCRMAGTRFLARGIDDDGFVANFVETETILYTERGQAQIVCAFLQV
RGSVPFFWEQDSQLLSNKVQITRSIDAAQPAFERHMDYLCNKYGSIHVVNLLSREKSHEN
ELTQRYHGHIKKLNEAGGSHSTDPASGSSRGGLVAVTDFDFHHEVSKQGYSAATRVLNRV
IDAMEEYGFYSADSSSPNVTLQNGVFRTNCLDCLDRTNMIQQVISRQALQIFLDRNHLGC
NPDFWSKHNILWADNGDQLSQIYAGTNALKTSYTRSGKMNLAGALADVTKSVGRLYINNF
TDKTKQNTTDVLLGRLSDQEGILLYDPINDFVVKELERRKLEFSSTTNIKVFAGTFNLNG
ELSDADLAGWFFPPKSAKELSGGAGFDVHDDLPSIVLVGFQEIVQLTPGQILNADPGKKE
FWEKRVEAVLNTRDEYVLLRSHQLVGTALLLFVRKAEVGFVKNIEGAIKKTGLGGMAGNK
GGVAVSFSYANTRFCFITAHLAAGTSNIEERHHDFKTLNTGLRFSRGLTIKDHDCVIWLG
DFNYRIDMDGDVVRQIVAKKEYGLLFEHDQLNRQMVLGETFPYYNEMEINFPPTYKFDNG
TATYDTSEKFRTPSWTDRVLYKGTGLRGINYGCVSDLLFSDHRPVYAEFNAQILIVDQKR
KAALGKELYDKRRSEMGGSNDLISLSDLNEVTLTHGLPPPSTDARKWWISGGQTAKVPIV
PPAKGMILNPKKINPFEGDLPDFVDKPALPPRRKPIGSPPVKPMPKPKPSSLRSASAVSA
TAPQLPIPELSQTSLLDMPIGPIESQSSAGQSSSTEKSLLD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG