YALI0D06237g - DES1

Overview

Description uniprot|Q6CA36 Yarrowia lipolytica YALI0D06237g DES1 Ceramide C4 desaturase
Locus type CDS
Gene name DES1
Locus tag YALI0D06237g

Location

Species Yarrowia lipolytica Positions 799756..801114
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1359 (nuc.)
Previous locus YALI0D06215g Next locus YALI0D06259g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06237g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06237gYALI0D06237g_mRNA-001YALI0D06237g_CDS-001

Nucleotide sequence

 

>YALI0D06237g
ATGAGCACCGAGACACAAAACGAGGTGCGTTCGCGCCACGTGACCACCGCCAATGAGCAG
CACCCGAAAATCCATTCTGCCGGCCCCGTTTCCGAGGCGGACTTCTTTTGGACCTACCAG
GAGGAGCCCCATAGATCTCGACGGATGGAGATCATCAAGGCGCACCCTGAGGTGACCAAG
CTGACTGGACACGAGCCCCTGACCAAGTGGGTGGTTCTTGGAGTGGTTTCTCTGCAGTTT
ACATGTGCCTACCTGCTTCGAAACAGTCCCATTTTGAGCTGGCCGTTTCTGATCACAGCT
TACGTGATTGGAGCCGTGTGCATCCAGAACCTGTTTCTGGCGATCCACGAGCTGTCCCAC
AACCTGGGTTTCAAGAAGCCGATCCACAACAAGCTGTTTTCCATTTTTGCAAACGCCCCT
ATCGGAATCCCCTACAGCGCCGGCTTTGGACCCTACCATCTGCTACATCACAAACATCTG
GGCGACTTCCGGTTCGACACAGACCTGCCAACTCCCCTGGAGGCTGCACTGTTTAGCAAT
GTTGCCGGCAAGGCGTTTTTCGCAACCTTTCAGCTCTTCTTCTACGCCATCCGACCCATC
TGTGTCGCCCAGTTGCCCTTCTCGATCATCCACTTTCTCAACATTGCCGCCCAGGTGGCT
GTTGACGTGGCCGTGATCAAATTCTGGGGAATGCAGTCCTTCTGGTACCTTATCATATCG
TCCTTCTTTGCCGGTTCGCTTCATCCCGTCGCTGGCCACTTTATCGCCGAACACTACGTC
CTGGGAGATAACGTGGACGATGCGGAATCGACCATGAAGGAGTCTGGGTCGGATAAGTTG
ATGGCCGACAAGAACCGAAACTCCTCTTCGGTCGCACCCCCTGAGACCTACTCCTACTAT
GGTATCCTTAACCTGGTTACCTACAATGTTGGATACCACAACGAGCACCACGACTTTCCT
TTCGTGCCTTGGACTCGCCTGCCGGCTCTTAGAGAAATGGCCAAGGACTTTTACGACCCT
CTGCCTCAGGTTAAGAGCTGGAGTATGACCATTGTCGATTTCATCCGAGATGATCGAGTG
TCTTTGTGGTGTCGAGTGAAGAGAGATGAGGCTCAGATGAAGCGGTTGGCAGCACGAACC
TAGATATGAAGGAGACGAGTATCTACTGAGCGTCTAGCAAGTGCGATACCTATCCATCGA
GAGCGCTGCACCCATAGTTTTTGGGTGGTTAAAATAACATGGCCACACCCACAAGCTGGT
GTGACGAAAAGAACATAGTTCATGTATTTATTGGTAAAATTGAGACTCGCACAAGTGGCT
AATAAGTAAGAATCCATATAATATATTACAGCTAATCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06237g_CDS-001

Protein length: 381 aa.
Product: Ceramide C4 desaturase
Gene: DES1

>YALI0D06237g_CDS-001 MSTETQNEVRSRHVTTANEQHPKIHSAGPVSEADFFWTYQEEPHRSRRMEIIKAHPEVTK
LTGHEPLTKWVVLGVVSLQFTCAYLLRNSPILSWPFLITAYVIGAVCIQNLFLAIHELSH
NLGFKKPIHNKLFSIFANAPIGIPYSAGFGPYHLLHHKHLGDFRFDTDLPTPLEAALFSN
VAGKAFFATFQLFFYAIRPICVAQLPFSIIHFLNIAAQVAVDVAVIKFWGMQSFWYLIIS
SFFAGSLHPVAGHFIAEHYVLGDNVDDAESTMKESGSDKLMADKNRNSSSVAPPETYSYY
GILNLVTYNVGYHNEHHDFPFVPWTRLPALREMAKDFYDPLPQVKSWSMTIVDFIRDDRV
SLWCRVKRDEAQMKRLAART*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG