YALI0D05665g

Overview

Description similar to uniprot|P40157 Saccharomyces cerevisiae YNL212w VID27
Locus type CDS
Locus tag YALI0D05665g

Location

Species Yarrowia lipolytica Positions 726903..729464
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2562 (nuc.)
Previous locus YALI0D05660r Next locus YALI0D05676g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05665g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05665gYALI0D05665g_mRNA-001YALI0D05665g_CDS-001

Nucleotide sequence

 

>YALI0D05665g
ATGAATTTTCTGCGCAACATTCTGGGCTCTGGGTCCAAGCAGGAGCTTGCGGTGATCCCG
TCAGGCCAGCTGTTTCTCAAACGGTCGCCGCACTCGGTCAAGGGCGTTTCCGAGTGCATC
TACAAGGAGGCAGCCGCCATCATCCGAAAGACCGAGGTGGAGTTCCAGAGCCAGCTCATT
GTCCAGAGAGTCTACGAGGAGGGCGAGGAGGCATTCGAGGGCACCGAAGAAGAGGACCAG
CTTGACGACGAAGAATGGTGCTATCTGATTGACGAGGCCCTTCGAATCAGCTACTTCATG
CAGGACGGCCATGTGGTTGTGACATGGAACGATCTCAATGGCGACCCCGGAGACCGGTTC
GAATTCATCTGCGACACCAGCATCAAACCCGAGGTGTATGACAAGTTCTCCAAGGTGGCC
CAGGAGTGCATGTACGAGCGAAAGTACACTGCAAGTGCAAAGGGAGTCAGCGAAGACGAT
CTCAACGAGTTTGACTACCCTCCTCCGGTAACAGAGGTCGAGGCCAATGAGTCTACCGCC
GTGGACGAGTCCGTGGCTGCTGACTTTAACGAGGTGGACAAACGCGTGGCACACGACACG
GAAGGCATCTTCGTTAAGGAGGAAGAGGAGGGGAAGAAGGAGAACAAGGCCCACGCTAGC
GTGCCTACAGCTGCTCCCGAGACTGTGGCTGCCGCGGTGGCTGCGCCTGCCTCCGCTCCT
GTTGTGCAGGACTTGCCCCAGTTCGACGCTCTCCTGGGAGAGAACAATGCTGAGCTGCAT
CTGTTTGATGCCGGGACCGGTGCGTTTGAACTGCAGGCAGCCTCCACCACCGTGCGAATT
GAGGAGGTGGCCAAGCAGTGGGAGTATTGGCTGACTGTGACGAACGGAACCAAACCCGTA
CTGGGCATGCCCATCACCTCGGAGATGAACCCCTGCTTCAACTACGAGCATCTGTCGTTC
ATCTTCAACTACTTTGCACCTACCGGAGCGGGTTTCTCGTGGCTGCTCAAGTTTGGCTCG
TTCGAGGAGCTCGAGATCTTCCAGCAGGTGTTCATGCAGGCTCTGTGGCAGAGACTGCAT
CGTCAAAAGTACACAACCGCTCCCGAGACAGAAAAGGACTACCTTTCCGAAGCCTTTGGA
GCTATGGATATTGACGACGAAGGCACCACCGGTCTGGAGGATCTTCCTGAGGAGGACGAG
GATGAAGATGAGTTTGAGGACTGCCCCCAGGGCCCCGCACGAGACTTCTCTGATGACGAG
GAGTACGACAACGACGAGGTGTTTGGAAAGAACGACGATCTCGACAAGAACAAGCTGCTT
GCCGTCGGAACTTCCAACGACCGGTCGTATGTTGTACGAGGAAACCGAATTGGAGTGTTC
AAAAATACTGCCGACAACGAGCTCGAGTTTGCCACCACTATTGAGAACATTTCCAAGCCC
GACAAGACGTCGTTCAACCCCGACAAGATGATGCTGCATTACCAGGACAAGCACATTGTG
CTGCAGGACAAGTCTGAGGGCAACAACCTGTACAAGATGGATCTTGAGTACGGTAAGGTG
GTGGACGAGTGGAAGGTGAGTGATGACTCCAAGAACGGCGTTGTCAGCTTTGCTCCCTCG
GCCAAGTTTGCGCAGATGACTGGCGAGCAGACCTTCCTGGGAATGGCCAACTCGGGTCTG
TTCCGAATCGATCCCCGTCTCAGTGGATCCAAGCTGGTTGATAGTGAGCACAAGAAGTAT
GCCACCAACAACCAGTTTTCGGCTCTGACTTCCACCGAGGGTGGCCACATTGCTGTGGCC
TCGCAGAAGGGAGAAATCCGACTGTTTGACCGACTTGGAATCAATGCCAAGACCGCTCTC
CCCGCCCTTGGAGATCCCATTCTGGGCGTCGATGTGTCTGCTGACGGCCGATGGATTCTG
GCCACCTGCAAGACTTATATTCTTCTGATCGACGCTACAATCAAGGATGGCAAATACGAG
GGCGAGACCGGATTCAAGCGGTCGTTTGCCAAGGACGCCAAACCCCGTCCCAAGCGTCTC
CAGATTTCCCCCGAGCATGTGGCCTTCATGCTTGCCGAGACTGGTTCTGGCTTGAACTTC
ACCAAGGCGCATTTCAACCAGGGCCCCAATTCTCGAGAGCAGACGGTTGTGACGTCTTCT
GGCCCATACGTGGTTACTTGGTCGCTTAAGAAGCTGCTGCGAGGAGACGCCAACCCCTAC
CTCATCAAGCGGTACTCTGACCAGGTTACTGCTGGAGACTTCCGATTCGGCACTGACAAG
AACGTCATTGTTGCCACCGAGGACGATGTCAACATGGTGTCCAAGAAGTCGTTCCGTAAG
CCCACGCGGGAGTCTCTGGCGACTCCTGGCATGCGACGGGGCACTCTGGGACGAAGTAGC
ATTGTTAACGAGTTGTACTAGGTGGACATTAGGAGCGAGTTGATGGACCGGAGAGATAGC
TGTGCATTTGAAAAACGAAAAAACACAAGCAAAAAGAAAGAAAAAAAATACAACTGGAAA
AGTTGGTTTATATAGTTAATAGATACCTAATGATACTACAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05665g_CDS-001

Protein length: 807 aa.
Product: Cytoplasmic Conserved protein of unknown function, putative

>YALI0D05665g_CDS-001 MNFLRNILGSGSKQELAVIPSGQLFLKRSPHSVKGVSECIYKEAAAIIRKTEVEFQSQLI
VQRVYEEGEEAFEGTEEEDQLDDEEWCYLIDEALRISYFMQDGHVVVTWNDLNGDPGDRF
EFICDTSIKPEVYDKFSKVAQECMYERKYTASAKGVSEDDLNEFDYPPPVTEVEANESTA
VDESVAADFNEVDKRVAHDTEGIFVKEEEEGKKENKAHASVPTAAPETVAAAVAAPASAP
VVQDLPQFDALLGENNAELHLFDAGTGAFELQAASTTVRIEEVAKQWEYWLTVTNGTKPV
LGMPITSEMNPCFNYEHLSFIFNYFAPTGAGFSWLLKFGSFEELEIFQQVFMQALWQRLH
RQKYTTAPETEKDYLSEAFGAMDIDDEGTTGLEDLPEEDEDEDEFEDCPQGPARDFSDDE
EYDNDEVFGKNDDLDKNKLLAVGTSNDRSYVVRGNRIGVFKNTADNELEFATTIENISKP
DKTSFNPDKMMLHYQDKHIVLQDKSEGNNLYKMDLEYGKVVDEWKVSDDSKNGVVSFAPS
AKFAQMTGEQTFLGMANSGLFRIDPRLSGSKLVDSEHKKYATNNQFSALTSTEGGHIAVA
SQKGEIRLFDRLGINAKTALPALGDPILGVDVSADGRWILATCKTYILLIDATIKDGKYE
GETGFKRSFAKDAKPRPKRLQISPEHVAFMLAETGSGLNFTKAHFNQGPNSREQTVVTSS
GPYVVTWSLKKLLRGDANPYLIKRYSDQVTAGDFRFGTDKNVIVATEDDVNMVSKKSFRK
PTRESLATPGMRRGTLGRSSIVNELY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG