YALI0D05621g

Overview

Description similar to uniprot|Q04895 Saccharomyces cerevisiae YIR028w DAL4 allantoin permease
Locus type CDS
Locus tag YALI0D05621g

Location

Species Yarrowia lipolytica Positions 721117..723011
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1895 (nuc.)
Previous locus YALI0D05599g Next locus YALI0D05643r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05621g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05621gYALI0D05621g_mRNA-001YALI0D05621g_CDS-001

Nucleotide sequence

 

>YALI0D05621g
ATGGCCCACGATTCCGAGCTCGAGCTGTCAGACGAAAAAGTCGTGCCTTCTATCAACCAA
GAAAAGCACTCCTTTTTCCAACGGCATCTCGACAACCACCCCCGAATGGCCCAATACAAC
TCGCAACTGCAGCGGTTCCTCAAGTGGATCGAGGTCCCGACCAAGGAAGGAGAGATCAAC
ACATTTCTCAACAACGAGGATCTGAAACCGGTCGAGGTCGCCCGCCAGACCTGGGGATGG
AAGAACTTCGTGTCCTTCTGGATCGCAGACTCCTTCAACATCAACACCTGGGAAATTGCC
GCCACAGGCATCCAGCTGGGACTCACCTGGTGGCAGGTCTGGCTGTGCGTGTGGATCGGC
TACTTCTTCTGCGGAGTCTTTGTGGTCCTGTCTGGACGAATCGGAGCAATCTACCACGTG
TCGTTTCCCGTGGCCGGCCGGTCGACATTTGGAATCTTTGGCTCCATCTGGCCCGTTATC
AACCGAGTGGTCATGGCCTGCGTGTGGTACGGAGTCCAGGGCTGGCTGGGAGGCCAGTGT
ATCCAGGTGTGTCTTCTGGCAATCTGGCCTAGTGCTCGACACATGAAAAACGGAATCCCC
GGAAGTGGAACCACCACCTTTGAGTTCCTCTCCTACTTTCTGTTCTGGCTCTTCTCCCTG
CCCTTCATCTACATCAGACCCCACAACCTGCGGCACCTTTTCATGGTCAAGGCCGCCATC
GTGCCTGTCGCAGGCATCTCATTCCTGGTCTGGACCTGTGTCAAGGCCCACGGAATCGGT
CCCATCATGAAACAGCCCGCCACCGTTCACGGCTCGGTCATGGGCTGGGCCTTTATGACC
GCCATCATGAACTCGCTGTCCAACTTTGCTACCATCATTGTCAACGCCCCGGACTTCACC
CGTTTCGCCAAAGAACCTAACGCCATTGTGCTGTCGCAGCTCATTGCCGTGCCCACTGCA
TTCTCACTGACATCATTCATCGGTATCATTGTGTCATCTTCGGCCACCGTTCTCTACGAC
GAAAACATCTGGAACCCCCTGGACGTTCTGCACAAGTTCCTGGAAGGAAACAAGTCCGGC
AGCCGAGCCGGCGTCTTCTTCCTGGGCTTTGCCTTTGCCGTGGCGCAGTTGGGAACCAAC
ATTGCCGCCAACTCGCTGTCGGCAGGCACAGACATGACCGCGCTGCTGCCCAAGTACATC
AATATTCGACGAGGAGGTTTCATCTGCGCAGGCATTGCTCTCTGCATCTGTCCCTGGCAC
CTGCTCTCTTCCTCCTCAAACTTCACCACCTACCTGTCTGCATACGCCACTTTCCTGTCG
GCCATTGCAGGCTGCTCTTTCAGTGACTACTACCTTGTACGAAAGGGCTACATCTACGTC
GGCGACCTCTACAACGCCTCTAAGGGCTCCACCTACATGTACCGGTACGGAGTCAACTGG
CGGGCATTTGCAGCCTACTTTTGCGGTATCGCAATCAACGTGGTGGGCTTTGCCGACGCT
GTGTCCGACGGAGGAGTCAACGAAACCGCCCGAAAGATGTACCAACTCAACTTCTTCCTG
GGCTTCCTGGTGTCGGCCATTTCATACTACGGCTTCAACTGGCTATCTCCAGTGGTAGGC
GCTCGAGAGACATGGAGCGAGGACCCCAACGCCTCGGCCATGTACGACGAGATCACCACC
GACGAGCTTTCTCAAGACTCGCAGTCGTACGACCCCGAGGAATGGGACAGAAAAATTGCC
AACGACGACCCTGTCAAGACAACCGCCATTATCTCCTAAAGCACCCCCTCATTCTTTTAG
CATAGCATAGCATAGCATAGCATTTAAAAATTTGCATCTCAAGCATCCCCGTGAGTAATC
GTGAGGGCCCCTAATATATTTATCGTTATTTATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05621g_CDS-001

Protein length: 593 aa.
Product: Allantoin permease, putative

>YALI0D05621g_CDS-001 MAHDSELELSDEKVVPSINQEKHSFFQRHLDNHPRMAQYNSQLQRFLKWIEVPTKEGEIN
TFLNNEDLKPVEVARQTWGWKNFVSFWIADSFNINTWEIAATGIQLGLTWWQVWLCVWIG
YFFCGVFVVLSGRIGAIYHVSFPVAGRSTFGIFGSIWPVINRVVMACVWYGVQGWLGGQC
IQVCLLAIWPSARHMKNGIPGSGTTTFEFLSYFLFWLFSLPFIYIRPHNLRHLFMVKAAI
VPVAGISFLVWTCVKAHGIGPIMKQPATVHGSVMGWAFMTAIMNSLSNFATIIVNAPDFT
RFAKEPNAIVLSQLIAVPTAFSLTSFIGIIVSSSATVLYDENIWNPLDVLHKFLEGNKSG
SRAGVFFLGFAFAVAQLGTNIAANSLSAGTDMTALLPKYINIRRGGFICAGIALCICPWH
LLSSSSNFTTYLSAYATFLSAIAGCSFSDYYLVRKGYIYVGDLYNASKGSTYMYRYGVNW
RAFAAYFCGIAINVVGFADAVSDGGVNETARKMYQLNFFLGFLVSAISYYGFNWLSPVVG
ARETWSEDPNASAMYDEITTDELSQDSQSYDPEEWDRKIANDDPVKTTAIIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG