YALI0D05401g

Overview

Description weakly similar to uniprot|P38724 Saccharomyces cerevisiae YHL047c TAF1 siderophore transporter for triacetylfusarinine C
Locus type CDS
Locus tag YALI0D05401g

Location

Species Yarrowia lipolytica Positions 702807..704723
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1917 (nuc.)
Previous locus YALI0D05379g Next locus YALI0D05423r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05401g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05401gYALI0D05401g_mRNA-001YALI0D05401g_CDS-001

Nucleotide sequence

 

>YALI0D05401g
ATGAATCTCGAGGAACTGGACAAAAAGGCCAAGTACGTCTTTGACACCAAGGACCGAGTC
GCCGAGAAGTTCTTTGAGTCTTTGCCCCCCAAGACCCGGGGGCTCATGAAGTTCCTCTTC
TCTCCCGACCATGACTATGACTCTGCCATTGAGCACTTTGATGACACCTCTTCCACCGAC
GATATCCAGCTGACCCACGCTGAGATTGTCCGACGGGTGTGGAGTAAGAAGCAGCTCATT
TTCGGCTGGATCTGCATGCTGATCATGTCGCTGGTCTCCACCATTCAGGCCTCTGCCTTC
CCCTCCTACATTGTCTACGCCTCTTCCGAGTTTTCCCAGATGGGAGCTCTGGCCTCGGTC
CAGATTGTCCAGGCCTGTATTTTCCTCGTCTCGCGAGCCCTGAGTGGAAAGCTGGCTGAC
AATTTCGGCCGATTCGAGGCCATGATCATCTCCGTCATCTGTCTAACCATCGGAAACGGT
CTGTACATGGGCTCCCATAATATTGTCACCTACTTTGCTGCCTTGGCCTTCTACTCCATC
GGAGACATTGGAACCCAGATGCTGTACGAGATTTTCGCCGCCGACACTTGTGATCTCAAG
GACCGAACTTTCTTCCAAACCATCACTCTGTTTGCCAACCTCTTCACTCCCTGGGTCGCT
GGTCCCCTGGTTGCCTCCGTGCTCAAGACCTCCACCTGGCAGTGGGGCATGGGAATGTGG
GCCATCATCACCCCCTGCTGTGCCATTCCTTTCCTGTCCACCCTGCTGTACTTCCGAATC
AAGGCTTACCGAATGGGTCTGCGAATCCGACGAGGTGACCCCAACAGAACATGGTTCCAG
AACACCATCACCGGCATCATCCGAATGGATCTTCCCGGTCTGGTTTTCCTCTGTGCCGGT
CTGATTCTTTTCTTTGTGCCCATCTCCTTCTGTGTTGGAACTGACGACTGGAAGATGCCC
CAGAACATCGCCATGATCACCTGTGGTACCTTCTTCCTCTACGTTGCCTTCCCTCTGTGG
GAGTTCTTCGGCACTAAGCACCCCTTCCTCAAGTTTTCGCTCATGAAGAAGCGTCTGGTC
ACCGTTCCCGGCCTCATCATTCTCCTCTACTACATGGCCTACGCCACCTACCATCCCTAC
TTCCAGGTCTGGCTTCTGTTGGCCAAGGGGCTTCCTCAGGCCCGAGCAACCAACCTGAAC
ATGGCCATGTTCGTTGCCCTCACCGGTACCACTCTGGTCTTCTCGCCTCTCATGCGATGG
AGAGCTAAGCTCAAGTCCGTCATCGTTTGGGGTACCATCCTGTACTTCATCGGCATGGGA
CTGACCTACGAGTTCCGAAAGCCCGAAAAGCCCCTCAACACCATGATTCTGGCCCAGATT
TTCGAGGGAGTGGGAGCTGGTCTGCTCGTCATCCCCATCATGGTCTACATCCAGGTGGTC
TGCAAACAGTCTGACACTGCCGCCGCCATCACCATCTATTACTTCTTCAACTCATGTGGA
ACCATTCTCGGTAACGTCATCTCTGCTGCCGTTTACCGAAACCACTTCCCCAACGTGCTG
CGAAAGACTGGCCTTTTCGCCGAGCCCGAGGTCAAGGCCATTTTCGGCTCCATCTACGTC
GGCCTCTCGTACAAGGTCGGAACCCCTCAGCGAGCTGCCATTGGCGCTACTCTCAACTCC
GTCATCCGATCGCTGCTTATCGGTCCGCTCATTTTCTGTGCTATCATGTTCTGTCTGGCC
ATCACCAACGCCGACATCAACCTCAACACGGCCCAGCGAATGAAGGAGGAGTCAGAGCAC
GTCAAGGGCGACGACAGCCAGTCTTCCGATCAGGGAGTGGTTATCGAGACCGCCTATGAA
GAGAAGTCCCCTATCTACGACGAGAAGAAGGTGACTGAGGTCGTCAACAAGGCCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05401g_CDS-001

Protein length: 639 aa.
Product: Conserved hypothetical protein

>YALI0D05401g_CDS-001 MNLEELDKKAKYVFDTKDRVAEKFFESLPPKTRGLMKFLFSPDHDYDSAIEHFDDTSSTD
DIQLTHAEIVRRVWSKKQLIFGWICMLIMSLVSTIQASAFPSYIVYASSEFSQMGALASV
QIVQACIFLVSRALSGKLADNFGRFEAMIISVICLTIGNGLYMGSHNIVTYFAALAFYSI
GDIGTQMLYEIFAADTCDLKDRTFFQTITLFANLFTPWVAGPLVASVLKTSTWQWGMGMW
AIITPCCAIPFLSTLLYFRIKAYRMGLRIRRGDPNRTWFQNTITGIIRMDLPGLVFLCAG
LILFFVPISFCVGTDDWKMPQNIAMITCGTFFLYVAFPLWEFFGTKHPFLKFSLMKKRLV
TVPGLIILLYYMAYATYHPYFQVWLLLAKGLPQARATNLNMAMFVALTGTTLVFSPLMRW
RAKLKSVIVWGTILYFIGMGLTYEFRKPEKPLNTMILAQIFEGVGAGLLVIPIMVYIQVV
CKQSDTAAAITIYYFFNSCGTILGNVISAAVYRNHFPNVLRKTGLFAEPEVKAIFGSIYV
GLSYKVGTPQRAAIGATLNSVIRSLLIGPLIFCAIMFCLAITNADINLNTAQRMKEESEH
VKGDDSQSSDQGVVIETAYEEKSPIYDEKKVTEVVNKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG