YALI0D05093g

Overview

Description similar to uniprot|P46957 Saccharomyces cerevisiae YJR006w HUS2 DNA-directed DNA polymerase delta, 55 KD subunit
Locus type CDS
Locus tag YALI0D05093g

Location

Species Yarrowia lipolytica Positions 664731..666333
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1603 (nuc.)
Previous locus YALI0D05071g Next locus YALI0D05115r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05093g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05093gYALI0D05093g_mRNA-001YALI0D05093g_CDS-001

Nucleotide sequence

 

>YALI0D05093g
ATGCCGGAGATACGTTCAAATCTGCCCACTACTGCCACCTCGCTCAATGATGGCTTCACG
TTGCCCATCACAAAACGCAACTACAACCGTCAGTATGCGCCAATCTACTACATGCGATTG
CACCAGCTCATGAGCCAGGTGCTGGATGCTGCTACTTCCAAATGGGCTGATAAGAACGTC
AAGTACCTCAACAAGTGTTTGGACGTTCTTGTTGGGGATACGGTGTTTGTGGTCGGCACA
CTGTTCAAGGACATGAAATACAAACCCAGCATGTTGGAGGAGGTGACCCGCAGCCATTGG
GGAGCTCCTCCGGGCAAGAAGCCCAAGTACGTGGACCCTCAGGGCGATTGTGAGGACGGT
GGACACAAGGACGATTCGTCGATTCAGCTGGAGGACAGCTCCGGTCGAATCACGCTCGTG
GGACCAAAGGTGCAGGAGTTCATGCTCATCACAGGCGTTGTTTGTGGAGTACTAGGCACG
GCAGGCGAAAACGGACGCTTCACGGTCGTGGATGTGGTCTGGGGCGGCTTTCCCGAACAG
ATTTATCGACCTCTGAGTGGAGTCAATGACGGAGAAGACGTTGAGATGGCTGACAATGAT
ACTCCTGAAGACACATACATTTGTCTTGCTTCTGGTCTGTACATTGGCCAGAAGAAGACG
GATTACAAACACGTGCTTCTGGCAGAATATCTCCAGGGGCTGCTTGAGGAAGATGGTGCA
AAAGATGGACTGGTAAAGCCCAAAAACATTTCGCGGTTCATTATGGCCGGAAACAACTGC
TCGTTGGAGTCAGAAAGACCCGTTATCGACACACTATCTCGAACCGTGGACCTCGACGCC
TTCAAGCCCATGGCTCGCGTTGACGAGTACATTGCACAATTGCTGCCATCCATCTCTGTT
GATATCATGGCAGGAAACGACGATCCCGGCAACATGTCGCTTCCTCAGCAGCCGCTGCAT
CTGTCCATGTTCCCTCAGAGCCGCAAGTTCAAAAAGGCCACCTTTGGGTCTGTTTCCAAC
CCCTACTGGTGGGACTTTTCAACCGACGAGGCGCCTCTCAAGGTGCTGGGAACCTCGGGA
CAAAACGTGTCGGACATCTACAAATATCTGATCGAAGGACGAGACGATATTCTGGATATC
ATGGAGCATACGCTTGCCTGGCGGCACTTGTGTCCCACTGCCCCAGATACCCTGACTTGC
TATCCTTATGGAGATGACGATCCCTTCATCATCAAGGAAACTCCCCACCTGTACTTCTGC
GGCAACCAGGACGAGTTCCAGACCAGTGTTGTCAAGCATGACGGAGTGTCAGTGCGTCTG
GTGGCAGTTCCGCGGTTTGATGAGACGGGAGAGGTGGTACTGGTGAACATGCGAACATTG
AAGGCAGAGGTGCTGAGGATTGTCGCCTAGCTGGAGAGCGGAGCTCAACGTAGCGAGGGT
AGGCAGCAGCACTACGAAGTAGGGGGTTTCGATGAGCGCTTCTAACTCTCGCTCTCAACA
GATACATGCCATGTTCTCAGCAATTGTCGCTGGGACTCTTGACAAACTACCTCTTGTAGT
GGGGACTACAAGTAGTTAGGAACTAATATATTGCACTTGCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05093g_CDS-001

Protein length: 470 aa.
Product: Subunit of DNA polymerase delta (polymerase III), putative

>YALI0D05093g_CDS-001 MPEIRSNLPTTATSLNDGFTLPITKRNYNRQYAPIYYMRLHQLMSQVLDAATSKWADKNV
KYLNKCLDVLVGDTVFVVGTLFKDMKYKPSMLEEVTRSHWGAPPGKKPKYVDPQGDCEDG
GHKDDSSIQLEDSSGRITLVGPKVQEFMLITGVVCGVLGTAGENGRFTVVDVVWGGFPEQ
IYRPLSGVNDGEDVEMADNDTPEDTYICLASGLYIGQKKTDYKHVLLAEYLQGLLEEDGA
KDGLVKPKNISRFIMAGNNCSLESERPVIDTLSRTVDLDAFKPMARVDEYIAQLLPSISV
DIMAGNDDPGNMSLPQQPLHLSMFPQSRKFKKATFGSVSNPYWWDFSTDEAPLKVLGTSG
QNVSDIYKYLIEGRDDILDIMEHTLAWRHLCPTAPDTLTCYPYGDDDPFIIKETPHLYFC
GNQDEFQTSVVKHDGVSVRLVAVPRFDETGEVVLVNMRTLKAEVLRIVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG