YALI0D04917g

Overview

Description weakly similar to uniprot|Q00539 Saccharomyces cerevisiae YHR086w NAM8 meiotic recombination protein
Locus type CDS
Locus tag YALI0D04917g

Location

Species Yarrowia lipolytica Positions 627424..628790
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1367 (nuc.)
Previous locus YALI0D04895g Next locus YALI0D04939g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04917g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04917gYALI0D04917g_mRNA-001YALI0D04917g_CDS-001

Nucleotide sequence

 

>YALI0D04917g
ATGTCAACCATCTACATGGGCGACCTGGAGCCGTGGATGGACGAAGCGGCCATCAAAAAC
ATGTGGGCCCAGGTCATGGGGCCCGACACCAACATCAACGTGAAACTGATACGTGATAAA
TTCACAGATAGCATCAACTATGGGTTCATCGACTTTGCTAGCCCTGAGCTCGCCGCCGCA
GCCCTCAAATTCAACGGCAAGCCCATCCCGGGCACAGACAGACTCTTCAAGCTCGGAGAG
GACAACGGAGACGGCGCTCCCGTGGAGTTCTCCATCTTCGTGGGCGACCTCGCGCCCGAG
TCCACCGAGCCAGAGCTGCTGCAAGCCTTCAAGAGCAGATACGAGTCGTGCCGGGCCGCA
AAGATCATGACGGACCCTGTGACGGGCCTGTCGCGAGGCTACGGCTTTGTGCGCTTCTCC
AGCGAGGAAGACCAACAAAAGGCGCTGCAGGAAATGCAAGGATACATGCTGGGCTCCCGG
CCTCTGCGAGTCTCCACCGCCACCCCCAAAAACCGACATCACCACCAGCCTTATATGCAG
TTCCAGCCACAGCAGTTCCAGCCCCCGGCTCACTACCAGCAGCTGCACTCGCAGCACCCG
TTCCCTCATCATCCCAATGGAGCCCCCTCACATCAGGTCCACCAGCCCTTCTACGGTGGG
CCCGCACATCCGCTCAACCAGTTCACAGACGCCAACAATACAACTGTGTTTGTGGGCGGC
CTGTCTTCGTCCGTGTCCGAAGACGAGCTGCGACAATACTTCCAGGGCTTTGGAGACATC
ACCTACGTCAAGATCCCACCCGGAAAGGGCTGTGGTTTTGTGCAGTACGTGCAACGACAA
TCCGCAGAAATGGCAATTACCCAGATGCAGGGCTACCCAATTGGAAACGGCCGAGTGCGG
CTCTCTTGGGGACGGTCTCAGAGCCAACAACAGGTCCACCATCACCATCAGTATAGACCC
GCCCCACAGCCGCTCATCTACCCGCAAATGGGCATCCCCGCCCAAAACTACGGACCCTAC
CAGCCTGTGTCGCCCGCACTAGCCCATAGACACGCTGCTCCATTGCAGACCCCTGCTATC
GGCGACCAGGAAGGCATGTCCACCAACGCAACCACACTCGCGTACGCCGCCGGACTTCCT
CCCGTGACTGGAGCCCCCGCGGCTCCCGGCGAGGACCCCTCGGAGCCCATTCCTGTGGCT
CGGCTCAATGAGCTCTATCTTGCTGCTCGGGACGGCCGTTTAGACCGTGTCGAGTCTGAG
TCTTCGGGCTACCATGGCGTTTACGCCCAGTAATTGCATGAGCCGGTATAACTGGCGGAG
GTAAATAAGAAATGAAAATCGCAGTATGGAGCGGACAAGTAGCAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04917g_CDS-001

Protein length: 431 aa.
Product: Conserved hypothetical protein

>YALI0D04917g_CDS-001 MSTIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTDSINYGFIDFASPELAAA
ALKFNGKPIPGTDRLFKLGEDNGDGAPVEFSIFVGDLAPESTEPELLQAFKSRYESCRAA
KIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKNRHHHQPYMQ
FQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDANNTTVFVGG
LSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQRQSAEMAITQMQGYPIGNGRVR
LSWGRSQSQQQVHHHHQYRPAPQPLIYPQMGIPAQNYGPYQPVSPALAHRHAAPLQTPAI
GDQEGMSTNATTLAYAAGLPPVTGAPAAPGEDPSEPIPVARLNELYLAARDGRLDRVESE
SSGYHGVYAQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG