YALI0D04807g

Overview

Description similar to uniprot|O60070 Schizosaccharomyces pombe Ash2-trithorax family protein
Locus type CDS
Locus tag YALI0D04807g

Location

Species Yarrowia lipolytica Positions 604139..605464
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1326 (nuc.)
Previous locus YALI0D04785g Next locus YALI0D04829g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04807g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04807gYALI0D04807g_mRNA-001YALI0D04807g_CDS-001

Nucleotide sequence

 

>YALI0D04807g
ATGGAGGATCTGCCACAGAAACGACGCAGAAAGACGAAACTCGATGAAGATGACAGTCAA
GTGAACATAAAAACCACATATGAAACCGATCCGACTGTGCTCATGCGCCTGAGACCGCCA
CAGCCGTCGGTAGCCGATTTCGGACCCATCAAAGAGCCACCAAAACGAACAGGCCCAATC
ACTGAAGGAGAGCCAATTGCCGCAGTTACAGGTACGGGGACGCCCGTATCGGGATCCATG
ACAATGGAGGAGATCCCATTGAACAAACGAGGGTTCCGGTACACGACATGCTTACCCAAC
ACTCAGCTAGATGACATCATGTACTCTGTGGGCGAATCCAAGCCATATTCCGTGTGTATG
AGCGCGTCTGACCGGTCGGGAATGTGTCACGTGGATGAGAACACCGTCACGTGCGACGGT
GGATGGAGAAGCGCGCGTGCCACAGCGTGTTTGAGAGAGGGCAAGTGGTACCATGAAGTC
AAGGTCGGAGACAGTGGCCACGTGAGTGAGAATGGCACACCTGTTCCTGCTGGTCACGTG
CGACTGGGATACAGTCGTCGGGAGTCCAACCTCGAGACTCCTGTGGGTTTCGATGGCTAT
GGATATGGACTCCGGGACGTGAATGGCGACCGTGTTCATGTGAGTCGAACCAAGTCGTTC
ATGTCCAGTGGGTTCAAGGCCGGCGACGTCATTGGGCTTCTGTTAAATCTCCCCAACCGT
GTAGAGCATGATTATACCAAGCTGAAGCGAGATCGATACCCCATCAAGTACAAGAACCAG
CTCTTCTTCGAGATGCTTGAGTATATCCCCACGAAACAGATGGAAAACTGGATGAACCCC
AAGAAGGGCGGTGTTTCTGCCATTGCCACAGCTGGTGGAGCTGATCCTGTGGCCAATCAC
ATTCTGGACGGCCAGTCATCCTGGGAACCAGCAGTATTGGAGGGATCTAGCATTGAGGTG
TACAAGAACGGCGAGTATATGGGCACCATGTTTTCGGAACTGCTTGATTATCGACCTCCT
TACTCCAAGTTCAATGCTTCCTATTATGCAGGAGATGCTGATGACGGTCTGCTGGGCTAC
TATCCCACAGTCAGTTGTTTCAAGGGAGGCAAGGTGGAATGTGTGTTCGACAAGAACGAG
TTTTCTGCCGTTCACGAAGATGTCAAGAAGGGCTTGGAAACTGGAGAGATCAAGTCTGTT
GGCGAGCGGTTCGATGAGATGATCGCGGAGGATGTGGTGTACGATATCTTGGACCAGGTG
GGATTCGAGTTGCTCACGGGTAAATTGTAGCAACTTTCAAGGAGGGTAATATATTGTATT
TAGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04807g_CDS-001

Protein length: 430 aa.
Product: Ash2-trithorax family protein, putative

>YALI0D04807g_CDS-001 MEDLPQKRRRKTKLDEDDSQVNIKTTYETDPTVLMRLRPPQPSVADFGPIKEPPKRTGPI
TEGEPIAAVTGTGTPVSGSMTMEEIPLNKRGFRYTTCLPNTQLDDIMYSVGESKPYSVCM
SASDRSGMCHVDENTVTCDGGWRSARATACLREGKWYHEVKVGDSGHVSENGTPVPAGHV
RLGYSRRESNLETPVGFDGYGYGLRDVNGDRVHVSRTKSFMSSGFKAGDVIGLLLNLPNR
VEHDYTKLKRDRYPIKYKNQLFFEMLEYIPTKQMENWMNPKKGGVSAIATAGGADPVANH
ILDGQSSWEPAVLEGSSIEVYKNGEYMGTMFSELLDYRPPYSKFNASYYAGDADDGLLGY
YPTVSCFKGGKVECVFDKNEFSAVHEDVKKGLETGEIKSVGERFDEMIAEDVVYDILDQV
GFELLTGKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG