YALI0D04400g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D04400g

Location

Species Yarrowia lipolytica Positions 544884..546196
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1313 (nuc.)
Previous locus YALI0D04378g Next locus YALI0D04422g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04400g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04400gYALI0D04400g_mRNA-001YALI0D04400g_CDS-001

Nucleotide sequence

 

>YALI0D04400g
ATGCGACGACCTGGAGAAGCACTACGGAATAACGCCCGGGCCAAGCGGCAAATCGTGGAT
GATGATGATGACGATGACGAGTACCCTCCCGTTAAGGGCGAGCAGGGCAACGACGGCATG
GGAGGTGGAGACCAAGACTATGATTACGGAGATGACAACGACGACGACGAGGAAGAAGAC
TCCAAGGAGAATGTCGGCCGAGCCAAGCGGGAACGTGACGTGAATGGAGACGGCGGAGGA
GTCATTCATGATCGAGCCACAAAGGAGCTCATCAGATACATGGTAGGAGCTCATTCTCAG
GGCAGGATCATCACCCGAGAGAAGTTGGAGGGTCTGATGATCAATGTCAAGCTGTTTGAC
GAGAAGGAGAGCCGAAAGGGCCAAAAGCTGAGCGCGGCGCTGGAAAAGTGCGTTCCGTAC
TTGAGAAACGTATTTGGATACAGTATTGTGCGGTTCGACAAGACCTTTCTGTTGGACCCT
GCTGTTGTTGATTTCAAGGACAAAGAATTCGTGCTGCAGACATGTCTTCCTCCCGTGTAT
AACGAAGCCAACGGTAGCGACTACGCACGTGCCCCTGTTTCTGATGAGGTTATGATGGCC
TATGTTGTGGCATGTCTTGCAGGTCTGGTGGTCAATATGGGGGTGGCTGACTACCCCGTC
TTGAGTCAGTACGTAACTTCTGTGGGGCTGGGCCAGTGTTTACACAAGGGCAAGCTCAAG
GGTGCCGATGAGATGATTGGACTGTTGTGCAAAAACGACTATCTCAACCTCTTCCCTATA
GGTGGTGCCGCCCTGCCCATGGCCAAGAAGGAGGTGGGCGCGGCCAAGCCCTCTGCCAAG
AACGTGGTCATCAAGGACTGCAAGGATCTGGGTCTGGGCCATCGCGATCCAGAGAAGGCT
GAGATTGCCCTGGGGCCAAAAATGTACTACGAGTTCAACACCCTGGCGGTGCTCTCGGTG
TTCGAGACAATCAACGGTGAACCCGTAAAGGGCGGTCTGGAAAAGAAGATCAAGCGTTGC
TGTTTTGGCGGTCCTGCACTAGAAGAGCAGGAGGGCGCCGAAGGCGCGGAAGAGGAGGTG
GAACAGTTTTCTGAACAGTGATAATCTGGAGGCGGGCGGAAAAGTAGCCAGATGCTTACT
AGGCAGTAAAAATGACTCCGAGGATTTAACTGCCGTGAAGACTTGCTGGAAAAAACAACC
ATGGAGAGGCTCACAAGTGTTCCATCAGGTGCCATGTTAAAGGAGAGTGTTGTACATCGC
CGTTACATGTACAATTACATAGCTATAGATGAATTTATTTATTGAAACGTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04400g_CDS-001

Protein length: 367 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D04400g_CDS-001 MRRPGEALRNNARAKRQIVDDDDDDDEYPPVKGEQGNDGMGGGDQDYDYGDDNDDDEEED
SKENVGRAKRERDVNGDGGGVIHDRATKELIRYMVGAHSQGRIITREKLEGLMINVKLFD
EKESRKGQKLSAALEKCVPYLRNVFGYSIVRFDKTFLLDPAVVDFKDKEFVLQTCLPPVY
NEANGSDYARAPVSDEVMMAYVVACLAGLVVNMGVADYPVLSQYVTSVGLGQCLHKGKLK
GADEMIGLLCKNDYLNLFPIGGAALPMAKKEVGAAKPSAKNVVIKDCKDLGLGHRDPEKA
EIALGPKMYYEFNTLAVLSVFETINGEPVKGGLEKKIKRCCFGGPALEEQEGAEGAEEEV
EQFSEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG