YALI0C08052g

Overview

Description similar to uniprot|P10962 Saccharomyces cerevisiae YAL025c MAK16 nuclear viral propagation protein
Locus type CDS
Locus tag YALI0C08052g

Location

Species Yarrowia lipolytica Positions 1062153..1064006
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1854 (nuc.)
Previous locus YALI0C08030g Next locus YALI0C08074g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08052g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08052gYALI0C08052g_mRNA-001YALI0C08052g_CDS-001

Nucleotide sequence

 

>YALI0C08052g
ATGTCGGCGAGTGACGATGTGAGTATCGATGGAAAGATGGAAGCGCCCAAGGGAGGTTCT
TTTGGGCTGGAAAGAAGTGCAGCAGAGTGGAAAAGTGGAAAAATCCGGATCTATATGGCT
TTTGGCAGGTACTTTACCGATCACTCAAGGCGGTTGTTAGACAGAGGAGGTGGTGGACGG
ATTTGTGACGAGATAAAGAAGGGGTGAAGCATTGGAAGAGCGATTTCGATGCTATTTTGA
ATGTTGGAGAAGAGCTATGTGTTTTCCTTGATGTGGAAACTGTACTACAGGCTACGTATG
TGGTTGGTACGGCTGTACTGCTACACAGACCTCAGGAATGTGTGTATGCTTCTGTTGGAA
CTGTCCGCGATACTATGCTATCTGCAGACGCTAGAACATTCAAGCGTGCTCCAAATCTGC
TTCAAATCAAATCTCAAACGTCCTTGTCGACCTCGTCCATTCTCCTAGTCTCCATCATGA
ACGCTGTCCATGAGACGTTCGGCAACACTGTGCCATCACCTGAAAGAAGACTCTATGAAC
ATTTTTTCGAGCTGTTTCGGATTTTACCGTCTACAGTCTCTAAAGATTCGGTCTGAGTCC
GTCTGAGTCCGTCTGAGTCCGTCTGCGACCTGCTATAACTGAACCTGAGCTCTACAATAT
GCTTTCCGAGTGCGACTAAATCACAAGCTTGAACCGAGATATCAGTTGAAACACTATAGA
TTATTGTCCACCGGCAGTTAGGCTGCCCACGACTGCTCGTTCCTACTAACACAGCTCATC
TGGGAAATTCTAAACGACCAATTCTGCTCGTTCAAGCTGAAAACCGGCAAAGGCCAGGAT
TTCTGCAAGAACGAGTACAACGTTACCGGCATCTGCGAGCGCAAGTCTTGCCCTCTCGCC
AACTCCAAATACGCCACCGTTCGACGGGTCAACGGCCGATTATACCTTTACATGAAGACT
GCTGAGCGAGTGCACACCCCCAATAAGTGGTGGGAGCGGATCCGACTGTCCAAAAACTAC
AAGCGGGCCCTGGAGCAGATTGACGAGCATCTCATTTACTGGAATGAGTTCCTGGTTGAC
AAGTGCAAGCAGCGTCTGACTCGTCTCACCCAAGTGGCTGTTGCTGAGCGACGTATTGCC
ATGAAGGAGGAGGATACCCATTATGTTGGTGTGGCTCCCAAGGTGAAGCGACGAGAGGCT
ACCCGAGAGCGAAAGGCTCTGGCTGCTGCCAAGGTGGAAAAGGCCATTGAGAAGGAGCTG
CTGGACCGTCTCAAGAGCGGAGCATACGGCGAGAACCCTCTCAACGTGGACGAAAAGGTG
TGGAAGAAGGTGCTCGAGGGCGTCGAGGGAGCCAACAAGGAAGATGAGGACGAAGAGGAA
GAGGAAGAGGAGGACGAAGAGGAAGAGGGTGGAGAGGTTGAATATGTCGAGGATGAGGAA
GACGATGACGATCTTGTGGAGCTGGAGGACCTTGAAAAGTGGCTGGGTGGAAGCAGTGAC
GAGTCTGGAGACGAGACCGATGCCTCTGAGGACGAGACTGATACCGACTCCGAGGACGAG
AAGCCTAAGAAGCGAAAGGCTGCTGCTGACGGTAAGAAGCCCAAGCCCAAGACCAAGAAG
CGAAAGGGTCCCAGCGTGGAGGTCGAATACGAGGAGGACAATGGCGAGAAGGAAAAGCAA
ATGGTGGACTGGTAGATACACTGAGAAGGAGCATAGACGGAGGAAAAATGTAATGTATAG
AAATACTGACTTGTTTGAGAGCGTTTGTAGTGGAAAGATGTCAGCTACTTCACTATCTTA
AGGAGAGATAAACAGAACGTCTTTGCAGTCAGACATCAGAAGTATGGGTGATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08052g_CDS-001

Protein length: 313 aa.
Product: Essential nuclear protein, putative

>YALI0C08052g_CDS-001 MSASDDLIWEILNDQFCSFKLKTGKGQDFCKNEYNVTGICERKSCPLANSKYATVRRVNG
RLYLYMKTAERVHTPNKWWERIRLSKNYKRALEQIDEHLIYWNEFLVDKCKQRLTRLTQV
AVAERRIAMKEEDTHYVGVAPKVKRREATRERKALAAAKVEKAIEKELLDRLKSGAYGEN
PLNVDEKVWKKVLEGVEGANKEDEDEEEEEEEDEEEEGGEVEYVEDEEDDDDLVELEDLE
KWLGGSSDESGDETDASEDETDTDSEDEKPKKRKAAADGKKPKPKTKKRKGPSVEVEYEE
DNGEKEKQMVDW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG