YALI0C07700g

Overview

Description similar to uniprot|D5GAV5 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0C07700g

Location

Species Yarrowia lipolytica Positions 1020184..1022125
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1942 (nuc.)
Previous locus YALI0C07678g Next locus YALI0C07722g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07700g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07700gYALI0C07700g_mRNA-001YALI0C07700g_CDS-001

Nucleotide sequence

 

>YALI0C07700g
ATGTACACTCTAGAACTCGATTTCGACCCCCGTTCCAGTTTCAGCGACTGGCGAGTTAGT
AGTGTGACCATCTCCGGCTTCGACAACGACACGGGCAAAAGCATGGACGCTGTCAAGGGC
GAGTATTTCGGCAAAGGTGTGGTTCGGCTGTTTCGAGGAGGCAACAACAATGCATCCAGC
TCGACTGAGGTCGAAGAGGTGTCTCCGGTGCCCTCTCTGATTGTGGCTATTCTGGCAGTC
CCCAGCTATATGACTGCATCCGACTTTCTGGGGTTCATCAGCTTGCATTCTTGTGAGAAG
GACATTTCACATATCAGAGTCATCAAATCGAGTCGAGAAGTGAACCGAAACATGGTACTT
CTCAAGTTCCGTATGGTTGAACGCGCCCAGGACTTTGTTGACAAGTACTCTGGCAAGGTG
TTTAATAGCATGGATCCTGAGACTTGTCTATGTGTGTTTATCCATGATATCAGCGTGGGA
GGCGAAGTTAGTAATAATACAAGCGTAGTTGGGGCAGACAACTTCCCGTACCTATTGTTG
GATCCTTTCACCAATGGATTCAGCAAAGGTAAACCGCTACCTCCTCCTACTCCTGATTTG
CGAGAGCTGCCTACTTGTCCTGTCTGCCTGGAGCGTATGGACAGTGATATCACCGGTTTG
GCAACCATCTTGTGCGAACACACGTTCCACTGTCACTGTTTGAGCAAGTGGGCTGGTGGA
AATTGTCCTGTTTGTCGATACAGTGGCAGAAAGAGCAGTGTGGGCAACTCTGCTGCTCCT
CCAGGGGCATGTACGACTTGTGGGGGAACAGAAAACACGTGGATTTGTTTGATTTGTGGC
AACATTGGATGTGGGCGGTATGCTCTGGGCCATGCTCATTCTCATTTTGACCAAACAGGA
CACGGGTACGCCATGGAAATGTCCACGCAACGAGTTTGGGACTATGTGAGTGATGGTTAT
GTTCATCGGTTGATTCAGAGCGATGTGGGCAAGCTGGTGGAGTTGGACGAGTCCAGTAGC
TCCAGCAACAGCAAGTTCGTGTACTCTGACGACGGCAAAAAAAGTGGAGACGTGGAACAG
TTGGCTCTGGAGTACACGGCTTTGTTGACGTCACAGCTGGATTCTCAGCGGGAGTACTAC
GAGGCTCTGTTTGCAGACTCGGCAAAAAAAGTGGAGGAGATGAGACTGGAAGTGCATAGG
GAAAAAGAGAGGGTCAAGAAGGAGCTCGAGGCCAAGAAGGAGGTGGCCAAGCTGGACGAC
TCGTTGATGTCCGAGAACGAACGACTCAGAAAGGAGCTCGCCAAGTGTCAGTCTGATAGT
GAGAAACTGAGCCAGTTGAGTAAGACATTTCGACAGTCTCTTCAAGATGAAAAGGCCATT
TCGGGCGCCATGATGGCCAAGGTGAAGAAGCTACAGACTGATAAGATGGCCAAGGAGGCT
CAGATCAAGGATCTGGAGGAACAGCTACGAGATGTCATGTTTTTCCTTGAGGCCAGAGAT
AAGTTGAAGGATGCAGACGAGGATGTCAAGGAGGGTACCCTAGTGATGAAGAAGAAGAAC
AAGAAGAAGTAGTGGGTGCAAGTATTTATTAATATCATGAAGTCACGAAAGAAGGAATTG
CGAGGAAGACAACGGATGCTGTCGCTCAAAAGCTACAAAGGTTTTAGAGGGCAACCCCAA
TTTGTTGGTGTCTGCATTGTAGAAGATCGGAATATGCAGATACTGAATCTGTTGAGCCCA
GTGACATGAAACTAAACCTCTTTGCATTCCATATGTACACTCCACAGAAGTCTTCACCTT
GTGACTGGGATGTGCAAATATTCGTCCTCTTCTTCCAAACTGTACGTCCAGAACGAAGGC
TTCCTTGACCAGAGAAAAAGAAACAATGGACTTGGACGTGTGGTAATTTATCTTTTCGTG
TTCAATTGTCTCATTATATCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07700g_CDS-001

Protein length: 524 aa.
Product: Conserved hypothetical protein

>YALI0C07700g_CDS-001 MYTLELDFDPRSSFSDWRVSSVTISGFDNDTGKSMDAVKGEYFGKGVVRLFRGGNNNASS
STEVEEVSPVPSLIVAILAVPSYMTASDFLGFISLHSCEKDISHIRVIKSSREVNRNMVL
LKFRMVERAQDFVDKYSGKVFNSMDPETCLCVFIHDISVGGEVSNNTSVVGADNFPYLLL
DPFTNGFSKGKPLPPPTPDLRELPTCPVCLERMDSDITGLATILCEHTFHCHCLSKWAGG
NCPVCRYSGRKSSVGNSAAPPGACTTCGGTENTWICLICGNIGCGRYALGHAHSHFDQTG
HGYAMEMSTQRVWDYVSDGYVHRLIQSDVGKLVELDESSSSSNSKFVYSDDGKKSGDVEQ
LALEYTALLTSQLDSQREYYEALFADSAKKVEEMRLEVHREKERVKKELEAKKEVAKLDD
SLMSENERLRKELAKCQSDSEKLSQLSKTFRQSLQDEKAISGAMMAKVKKLQTDKMAKEA
QIKDLEEQLRDVMFFLEARDKLKDADEDVKEGTLVMKKKNKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG