YALI0C07656g

Overview

Description weakly similar to uniprot|G1XA84 Arthrobotrys oligospora AOL_s00076g542 hypothetical protein
Locus type CDS
Locus tag YALI0C07656g

Location

Species Yarrowia lipolytica Positions 1015297..1016223
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 927 (nuc.)
Previous locus YALI0C07634g Next locus YALI0C07678g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07656g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07656gYALI0C07656g_mRNA-001YALI0C07656g_CDS-001

Nucleotide sequence

 

>YALI0C07656g
ATGAGCCATTACTTCACCCCTGTCGGCGGTAACATCCGTCAAGTCACCAAGGACATTGTC
ATCCACTCGTGTCCTTTCACTCGAGGCTACCTGCTGAACTTTGGAGGCCGAATGACCTGT
GTCAAGCTGCCCACTGCCGACGATGCCGTGGTCGTGTTTGCTCCTACTCCCGTCTGTGAA
CAGTCTGAGGCTGCTCTCAAACTTCTAGCCGGAGACAAGCCCAACGTCAAGTATCTCGTC
GCCCCTGACTTTGAGCACCACATGGCTCTCAAGGCCTGGAAGGACAAGTTCCCCAAGGCT
CTAATCATTGGACCGGAGGAGCTCAAGGAAAAGAAGAAGGCCGAGGGTATTGATATTGAC
ATTGCCTTCAAGCCCGAGGAGGGCAACAAACTTCTCTCAGGCGCGGCTCTGGAATCAGTG
GGTTTCCCCAAGGAGCTCGTGGACACCTTTGATGCAGTCTATTTGCCCAGCCATGCTAAC
AAGGAGGTTATGCTGTACCACAAGCCGTCCGAGACTCTGCTTGAGGCCGACGCCATCTTC
AACACTCCCTCCAACGAGCAGTACAAGGGCTCTGGAGTCAACCCCAAGGGATCCTGGGGT
ATCCCCAACCTCATGAACTACATGAGCTTTGACAGTTATCTTCAGCAGAAGCTGTGGAGC
AAGCTGTACCCTGATCCCGCTGCTGCCAAGAAGGCCTACAACGAGCTTTTGCGGCTACCT
ATCAGACGGATCATCCCTTGCCATGGAGATCTGATTGAGGGTCCTCCAGCCGAGATTGCC
TCGAAGCTGGAAGATCTGGTCAAGACTTTGTAAGGCATGAGAGATGTGTGCAACACGCGT
GTTCAATTGAACGATCGCTATAGTCGTGTCTGCGATGTTTACTAGAGGAGAGGGTACATT
ATTGAAAAATGAAAAAATGAAATATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07656g_CDS-001

Protein length: 271 aa.
Product: Conserved hypothetical protein

>YALI0C07656g_CDS-001 MSHYFTPVGGNIRQVTKDIVIHSCPFTRGYLLNFGGRMTCVKLPTADDAVVVFAPTPVCE
QSEAALKLLAGDKPNVKYLVAPDFEHHMALKAWKDKFPKALIIGPEELKEKKKAEGIDID
IAFKPEEGNKLLSGAALESVGFPKELVDTFDAVYLPSHANKEVMLYHKPSETLLEADAIF
NTPSNEQYKGSGVNPKGSWGIPNLMNYMSFDSYLQQKLWSKLYPDPAAAKKAYNELLRLP
IRRIIPCHGDLIEGPPAEIASKLEDLVKTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG