YALI0C07172g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C07172g

Location

Species Yarrowia lipolytica Positions 955882..958447
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2566 (nuc.)
Previous locus YALI0C07150g Next locus YALI0C07194g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07172g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07172gYALI0C07172g_mRNA-001YALI0C07172g_CDS-001

Nucleotide sequence

 

>YALI0C07172g
ATGGCCCGAAAATCCACCCCAGAGCCTGAGATGAGACGCAAGACTCGGGTCAAGGCCAAC
ATTTTGCATGTGAGCAAGGAAGGGATATTCGACAGCGCCGGAAAGTCTGCTCAGATCTTT
GACAATGCGGGAACCAAGCCTGGGTCCCAGGCACAGTTACGTCAAGAGCAACAACAAGAG
CAACAGACACAAACACAATCGCCCATGGCAAAGCTGAAGCAAATGGTACGCCGAAACAGT
GCTCCTCAGCAGCCCCAGTTGCAGCAACCCCACCAGTCACAGCAGCAGCAACAGCAGCAG
CAGCAGCAACAGGGTCAACCCCAACAACAAACACTAACCACCCGTCTGTATCTCCAAAAC
AAGTCTCTGGCACGACAGAATTCCAATCTCAACACCAAAATGTCGGCTTTGGAACACCAT
ATGAGCGAACTTATCAGTGAAAACATTTGTTTGCGGCAAAAGAATCTCGAGTTGCAGAGA
AGCCACGACAATTGGTTGCGATCGCATGTCAGCCAGAATCTCAAAAAGCAACTGCAACAG
CATATCAATGGAATCAACGATTTGATGCAAGGACTGTTGGGAGAAGTCGATGGAGACTCG
GAGCAACGCTCTCATGAATCGGCTTCTCAGGAGCACTTTGAGCTTTCCCTTTCCAGATCA
CTTTCAAAGACTCCCGATTCTCGAGCTCTATCTAGAGGTTCTCCTGTATCTGGCAGACAC
TCGCTCTCTAGAGGTTCGGCAAGTCGACAGACCATGGGTCCTGCTGACTTTGCACGACGA
CGGTCTTCTCGACGTCGATCATCGTTCTTTGGCGAGCTGCCCCTGCTGCAGGACGCCGAG
GACGTGCTCGATCCTTCGGCAGAACAATTGCATTTGGAGGCTCGAGATGTCGTCACTCCG
ATGGCTGACGACGTTGAGGGATGGGGTGAGGTTCCAGTTGACGAGGTGAATGCTCACATG
GAGGAGATGGAGAAGCAGCATCAGGCAGAGGAGGCAGAGAGCGAGATGGATGTTGATAGA
GGAGAGAAGGTGCATTTCAATGAGCACGTGGAGGAACATTACGACGAGCCAATGGAAATG
GATACTCAGGAGACACAGGATACATCATTCTCCTCTGCTGTCCGGGAGACTTCTTTCCCT
TCACCTATCCAAGAGACTGTTCAGGAGACTTCTTTCGCCTCTCCCGAGCACGAATCGTTC
CCTTCCCTGATCCAGGAGACTTCTTTCCCCTCGCCTGTGAAGGAGAAGTCGTCGTTTGCT
TCACCTATAAAAGAGAACGCCTCTTTTGCATCGCCTGCCAAACAGAAGCCCTTCCCTTCA
CCAATCGACGAGTCTTCTTTCCCGTCTCCCTTCTCCAGCTCCTTCCGACGGGTAACTTCT
GCCCCCAGAGGAGAGCCTATGGAGGAAGTGTCCACAGATGGAGAGTCCTTTGCATTCCTT
CAGCAGCGATCTCGTCCCAACTCGAGCCATTCACGGCCTAACTCTCGATCCGCTTCTCGC
AACATTTCCTCCCGCCCTGGATCTCGGGAGAAGCAGATCCACGTGTTTGCCGACCCTGTA
TCCCCTGTTAAGGAAGCTGGCCTTGAGGCCTCTGCCCCTGTGAACCCAGCCCCTTCAAAT
AAACCAGCTGCTGTCTCTACAACCCCTCCTCGATCTCGTCCTTCATTGTTTGATACCCCC
GAGAGTGCCAAGGAGCGACAGGAGAAGGAGCGGAAGCGACGAGAGAGCATGGAGCAGGTA
GTGGAGGATCCCGTGTCACCCTGTTCCCGTCCCAGCAGTCGACGATCTTCCCGAAGAGCC
AGTACTGAGAAGGAGAAGGCGGCTGAGGAGGCTGCAAAGCATGAGGAGATGGAAGTTGAG
GAAGAGCATGTTCAGGAGGAGAAGGTTGAAAGGAGGGTTAATCGTTCTCGACGGACTTCT
ACTAAGACAGCTGAGTCACTTCCTGTATCTACAGGACTCACGACTGTGGAGTCTTTGGAG
AAGCCCGTTTCGGGAATGTTTGAAAAGGGTCTCGAGAAGCTTCAGAGTCTGGACAACAAC
GTGACTGCCCGGAAGAGTCGCGCTCCAACTGCCACCGGTGGTGTCAAGGTGACTACATCA
AGAAAGAGCACCAAGGCCACTGCCAAACCTTCCAAGACCTCTCCTCTGATGCAGAAGGAT
GCCAATGGCAGCAAAAATAATGGAGCCGATGGAGTCAAGGGCAAGGTCGAGACTGTTAAA
ACATCCAAGCTTGCCGAAAAGCCCGTCAAGCCCGTCAAGGTGGCAGCTGATACGGTTGCC
AAGAAGCCCATCAAGCTGGAAACCCCTGAGCCTCGTTCTCGGCGATCTCGAGGGGCTCCT
GTCAACTACAAGCTTCCCTCTGTGGGTTCCAAGCTGCGTCGGGAGACCGATGGCTTTGTT
GATGCAGTTGGAGGGCTCAAGCGGTCTCTGGGTGCCTGTGATGAGAACGGCATGAAGCGA
CGGCGCATCTAGGGGACCCGAGTAGGGTGTGAGAACGCCCGACGTGTATATATATCTACA
CATGTACACTGTAGCAGCTAATATGTATTTATAGTGAGATGAACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07172g_CDS-001

Protein length: 824 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C07172g_CDS-001 MARKSTPEPEMRRKTRVKANILHVSKEGIFDSAGKSAQIFDNAGTKPGSQAQLRQEQQQE
QQTQTQSPMAKLKQMVRRNSAPQQPQLQQPHQSQQQQQQQQQQQGQPQQQTLTTRLYLQN
KSLARQNSNLNTKMSALEHHMSELISENICLRQKNLELQRSHDNWLRSHVSQNLKKQLQQ
HINGINDLMQGLLGEVDGDSEQRSHESASQEHFELSLSRSLSKTPDSRALSRGSPVSGRH
SLSRGSASRQTMGPADFARRRSSRRRSSFFGELPLLQDAEDVLDPSAEQLHLEARDVVTP
MADDVEGWGEVPVDEVNAHMEEMEKQHQAEEAESEMDVDRGEKVHFNEHVEEHYDEPMEM
DTQETQDTSFSSAVRETSFPSPIQETVQETSFASPEHESFPSLIQETSFPSPVKEKSSFA
SPIKENASFASPAKQKPFPSPIDESSFPSPFSSSFRRVTSAPRGEPMEEVSTDGESFAFL
QQRSRPNSSHSRPNSRSASRNISSRPGSREKQIHVFADPVSPVKEAGLEASAPVNPAPSN
KPAAVSTTPPRSRPSLFDTPESAKERQEKERKRRESMEQVVEDPVSPCSRPSSRRSSRRA
STEKEKAAEEAAKHEEMEVEEEHVQEEKVERRVNRSRRTSTKTAESLPVSTGLTTVESLE
KPVSGMFEKGLEKLQSLDNNVTARKSRAPTATGGVKVTTSRKSTKATAKPSKTSPLMQKD
ANGSKNNGADGVKGKVETVKTSKLAEKPVKPVKVAADTVAKKPIKLETPEPRSRRSRGAP
VNYKLPSVGSKLRRETDGFVDAVGGLKRSLGACDENGMKRRRI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG