YALI0C07128g

Overview

Description similar to uniprot|P33734 Saccharomyces cerevisiae YBR248C HIS7 Imidazole glycerol phosphate synthase (glutamine amidotransferase:cyclase), catalyzes the fifth and sixth steps of histidine biosynthesis
Locus type CDS
Locus tag YALI0C07128g

Location

Species Yarrowia lipolytica Positions 947373..949089
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1717 (nuc.)
Previous locus YALI0C07084r Next locus YALI0C07150g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07128g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07128gYALI0C07128g_mRNA-001YALI0C07128g_CDS-001

Nucleotide sequence

 

>YALI0C07128g
ATGCCAATTATCCACGTGATCAACGTCGAGTCTGGCAACCTGCGGTCTCTGGAAAACGCC
CTCAACGTGCTGGGATACACGGTGGAGTGGGTCTCTAGCCCAGACCAGATCACTGACTCC
ATTGAGAAGCTCATTTTCCCCGGAGTTGGCAACTTTGGCCACTTTGTGAAGGAGATTGAC
GCCCGAGGATTCATTGGCCCCCTCAAGAAGTACATTGAGAGCAAACGGCCGTTGTTTGGC
ATCTGTGTGGGTCTCCAGGCTTTTTTTGAGGGATCCGAGGAGTCCAAGACTGTTGCAGGA
CTGGGTCTTGTGCCCGGTGTTCTGAGCAAGTTTGACGATAAGGACAAGAGCGTGCCCCAG
ATTGGCTGGAACTCGGTGGATAGCCGAGATTTCGCCGAGCACAAGTCTCTGTACGGCATG
GTGCCTTCTTCCAAGTACTACTTTGTGCATTCGTACGCTTGTATTCTGGATGAGGCCGTC
AAGAACAAGATCGAGGCTGCAGGCTGGGATATTGCCACGTCACAATATGGTAACCAGACA
TTTGTGGCTGCTATTTCCAAGGACAATGTTGTTGCTACCCAATTCCACCCCGAGAAGTCT
GGAGCAGCCGGTCTGCGTGTGATTGACGCTTTCCTCAAGGGTAAGAAGTACGTGGAGGAC
CCTGTAATTGCTCCCCAGACATCGTTCGGTCTCACAAAGCGAGTCATCGCCTGTCTGGAC
GTTCGAACCAACGACCAGGGTGATCTTGTTGTTACCAAGGGAGACCAGTATGACGTGCGA
GAGAAGACTGGAGAGGGCCACGTACGAAACCTCGGAAAGCCAGTTTCCATGGCCGAAAAG
TACTACAAGGACGGAGCCGATGAGGTCACTTTCCTTAACATTACTTCGTTCCGAGACTGC
CCTGTTCAGGATCTTCCCATGCTGGAGGTTCTTCGACAGACTTCCAAGACTGTTTTTGTG
CCCCTGACTGTCGGAGGTGGTATCCGAGACGTAACTGACTCTTCTGGAAACGTCACCACC
GCTCTACAGGTTGCTACCCAGTACTTTATGTCTGGTGCCGACAAGGTGAGTATTGGTAGT
GATGCGGTCTTTGCTGCCGAGGAGTACTACAAGAGCGGCAAGAAGCTATCTGGTAAGACC
CCCATGGAGACTATTTCCGCCGCATACGGAGTCCAGGCCGTTGTTGTTTCTGTCGACCCC
AAGCGAGTCTACGTTGATGCTCCCCTGACCGACAGAGTTTGCATTGAGACCAAATACCCC
TCTGCCGACGGAAAGAAGTACTGCTGGTACCAGTGCACCGTCAAGGGCGGACGAGAGGCC
CGAGATCTTGGCGTTTTCGAGCTCGTCCAGGCGTGCGAGGCTCTGGGAGCTGGAGAGATT
CTGCTCAACTGCATTGATAAGGACGGAACCAACTCCGGTTTCGATCTTGAGCTCATCGAC
CACGTCAAGTCTGCCGTCAAGATCCCCGTCATTGCTTCCTCCGGCGCTGGAAACCCCGGT
CACTTCGAGGAGGTCTTCCGAGAGACCTCTGCTGACGCGGCTCTTGGAGCTGGTATGTTC
CACCGAGGAGAGTACTCCGTCAAGGATGTCAAGGACTTCCTGGAGAACAAGGGCGAGGTT
GTGCGAGCCTTTGAGCCAATTGAGCTGGTTCACGTTGAGTAAGGGGCTGGTAAATAGATG
AATTATGATACAAAATATGAATGATTAACTCACAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07128g_CDS-001

Protein length: 554 aa.
Product: Imidazole glycerol phosphate synthase, putative

>YALI0C07128g_CDS-001 MPIIHVINVESGNLRSLENALNVLGYTVEWVSSPDQITDSIEKLIFPGVGNFGHFVKEID
ARGFIGPLKKYIESKRPLFGICVGLQAFFEGSEESKTVAGLGLVPGVLSKFDDKDKSVPQ
IGWNSVDSRDFAEHKSLYGMVPSSKYYFVHSYACILDEAVKNKIEAAGWDIATSQYGNQT
FVAAISKDNVVATQFHPEKSGAAGLRVIDAFLKGKKYVEDPVIAPQTSFGLTKRVIACLD
VRTNDQGDLVVTKGDQYDVREKTGEGHVRNLGKPVSMAEKYYKDGADEVTFLNITSFRDC
PVQDLPMLEVLRQTSKTVFVPLTVGGGIRDVTDSSGNVTTALQVATQYFMSGADKVSIGS
DAVFAAEEYYKSGKKLSGKTPMETISAAYGVQAVVVSVDPKRVYVDAPLTDRVCIETKYP
SADGKKYCWYQCTVKGGREARDLGVFELVQACEALGAGEILLNCIDKDGTNSGFDLELID
HVKSAVKIPVIASSGAGNPGHFEEVFRETSADAALGAGMFHRGEYSVKDVKDFLENKGEV
VRAFEPIELVHVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG