YALI0C06974g

Overview

Description weakly similar to uniprot|Q10478 Schizosaccharomyces pombe Hypothetical protein C17C9.06 in chromosome I
Locus type CDS
Locus tag YALI0C06974g

Location

Species Yarrowia lipolytica Positions 934848..936780
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1933 (nuc.)
Previous locus YALI0C06963r Next locus YALI0C06996g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06974g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06974gYALI0C06974g_mRNA-001YALI0C06974g_CDS-001

Nucleotide sequence

 

>YALI0C06974g
ATGGAGGACGAAGACGTGAGTATTCTTGCTTGACAGACCTGAGGGGAGGCTTATCGTCCC
TTGAATCACCACGGATCAAGGGTGTATAGATGGCGTGATTCAATGAGAGATTACTGGACT
GATTTTGATGAAGTTCGTCTTTCTCGGCTAATTGTGGCGGAATGATGGAAGCAATGTGAA
TAATCGACTCTTCGGGGCAGCGCAATCGCCATGGTTATGGTCCTGTGTTGGTGGTTGCAT
TATTTATGGGGGGTATACAGCCGATATGGGTTTTGGACTTCAACTGTATCTCCAGCTTTG
AGGTTACATTGACGAAAGTAGTCTCGTTGGAATCGGCAAAGTAGCGCGGTTAATTTGATA
CTACTTACGATGATACATCCTGCCGATATCACCAGTTACAGACCCAGGTCTCGCTCATCT
CGGCTCGCTTACCGAACTCGCTAACATCAGGTATTCCAACGTCTCTCGAGACACCACAAT
GAAGGCGCTGCTGCCAGTAAAGAAGAAATCGACGCTTCTGCTCTGGAAGCACAGCGGTCG
TTACTACTGTCCCTCCTCGAGCAGAATAACACTCGTGAAACAAAAATCCTGAGTGTGGTG
ACCGAGGGAGGCCGTGCATCACGCGACTCGTTCGTCCGAGCTCAGCTCAAGCCGCTGCTT
GAAACTGACACCATGACTTTCACAGACCTGCTCAAGCGGGTTGATACGGTAAACCGTGAT
CTGCAGTCATTTGGGTGCTATAACAATGTCCAGATTACGCTACATGGCGTGGACGACCAG
TTTTCGCTTGGAAACATGTTTGGAGGAGGCAACGCTTTGACTGTTCAACCTGTTTTAAAA
CTTGCCGAAGCCAAACGATTTACAGCCAAAACTGGAACAGATGTTGGAAACGGAGAGGGA
AGTGGATACATCAACTGCCAGTTTAGACACATGTTTGGAGGAGCCGAGACGCTCAACTTT
GACGCCTCCATGGGCACCCGAACCAAGTCTAACTATATGCTGGCTCTCACGAGTCCTATA
AACAACAGTGCTCGATGGAAGGGAGAGACCATGGCATTTGCCACTTCTCGAGACATTCCC
TGGTGTTCGCATTTACAGAGCGTTCAAGGAGGAGCTTTGAAGCTGAGATATCTGGGCTTC
CCCCACACTTTGGATCTGTCTGTGGAGACTCTGGTTCGAACTATATCTGCCTACTCTGAG
GCTTCTCGAACGGTCAAGTTTGCTGCTGGAGATGATATGAAGCGAGCTATGAGCGCCACA
TACACGTATGATTCACGTGACATCCACGTGATGCCCACCAAGGGATACATGGTCAAGCTT
ACTGGAGAGTATGTACTTTCCAGCAACCTGTTGAGACTTCAGTCTGAATACAGCTCTGGT
GTGCGAAGCAAGTATGCCATATTCAACTGGGGCATGAAATGCGGTCTTCTGAGCCGAGAT
GTCGGCAGTTATACCCACGGAGCCGTTCAGAGCAACGTTCATCTGATGGACCGGTTCTAT
CTTGGAGGAGCTAATGATGTTCGAGGTTTTGCACTCAACGGTCTTGGTCCTCGAGATCAG
AACGATTCCATTGGAGGTTCTCTCTACAACTGTCTTGGTATCAGTGTTTTTACTCAGGTT
CCTGGACTAAAGTACGGTCTTGACAATCCTCTGAAATGGCATCATTTTGTCAACTGTGGA
GGCTTGCTCGGACAACGAGATGTCAAGACTTTGCTGCACAACCAGTCTGTTTCTGTGGGC
ACTGGTCTTGTCTACAACCATCCCGCTGCTCGGTTTGAGCTCAACATCTGTGCTCCTCTG
GTAGCCCGAAGCACCGACAAGATGCGAAAGGGGCTCCAGTTTGGCGTTGGAGTCAGCTTT
TTGTAAATACTAGGACTCGAAAAAGACGCAAGGGTACATACATATAGATGAATGACGAAA
TGACATTACTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06974g_CDS-001

Protein length: 477 aa.
Product: Conserved hypothetical protein

>YALI0C06974g_CDS-001 MEDEDVFQRLSRHHNEGAAASKEEIDASALEAQRSLLLSLLEQNNTRETKILSVVTEGGR
ASRDSFVRAQLKPLLETDTMTFTDLLKRVDTVNRDLQSFGCYNNVQITLHGVDDQFSLGN
MFGGGNALTVQPVLKLAEAKRFTAKTGTDVGNGEGSGYINCQFRHMFGGAETLNFDASMG
TRTKSNYMLALTSPINNSARWKGETMAFATSRDIPWCSHLQSVQGGALKLRYLGFPHTLD
LSVETLVRTISAYSEASRTVKFAAGDDMKRAMSATYTYDSRDIHVMPTKGYMVKLTGEYV
LSSNLLRLQSEYSSGVRSKYAIFNWGMKCGLLSRDVGSYTHGAVQSNVHLMDRFYLGGAN
DVRGFALNGLGPRDQNDSIGGSLYNCLGISVFTQVPGLKYGLDNPLKWHHFVNCGGLLGQ
RDVKTLLHNQSVSVGTGLVYNHPAARFELNICAPLVARSTDKMRKGLQFGVGVSFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG