YALI0C06864g

Overview

Description weakly similar to uniprot|Q6BLL1 Debaryomyces hansenii DEHA2F12606g
Locus type CDS
Locus tag YALI0C06864g

Location

Species Yarrowia lipolytica Positions 920554..921810
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1257 (nuc.)
Previous locus YALI0C06853g Next locus YALI0C06886g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06864g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06864gYALI0C06864g_mRNA-001YALI0C06864g_CDS-001

Nucleotide sequence

 

>YALI0C06864g
ATGTCGCAGTTCACCAAACTTCAGTACATGAAGAAGGCCGAGCTCATGAACCTGGCTCAG
TCTCTGGACCTGGCTGATGAGGGCACCAAAAACGACCTGGAGGATCGTATCACGCGGGCT
CTTTCTGCCCGACGGCTCGAGCTCGAGGCCACTGATGAGTTCAACTTCCTCTACACCTCT
AGTCCGCGAAAACGGATTGCCCGAGCCCCTCGAGTGCCTGCAGCTGTGCAGCCCGACGTC
AAGGTGAGCAGTCTGGACGCTGACGATGAGGACGACGATGAGGATGATGACGACGAGGAC
GACGAGGACGAAGAGGACGACGAAGAGGAGGAGGACAGCGAGCCCACTGAGACCCTGGCC
GAGCATTGGGCCCGATGGAAGGAGGTGGTTGGTGGCCACGTTGAGGACCTGTACCGAGAG
GTCGAGTTCCAGGTCGAGGAGGCCGTGTCGTTTGTGCGATACCAGCTGTCCACTGTCGAG
TCCGCCACCATCTTTGCTCTGCTCATTGAGCTTTACTACCTATTTGTGCAGCTCATCCCC
TTCCAGCTGGGTCTCCGATGGGGCCGAATCCCCACCCGAGTGGGCCACTCCCTCATCCAG
CACCTTGAGGATGGCGGTCACCACGTTGTCAAGGCCGGATGGTTCGACCTCAACGACTGG
TTCCCCCTGCACGTGGTCCAGACCCCCGACTTTTCCGTTCTGCTCCAATGCAAGACCTGG
TCCACTCTGGTATTCTGGGCCGTCGGAGCCATCGCTCTGCCCGCTACTGTGGCCTACTTT
GTCAACTTCACCGCCACAAAGAAGAAGACTCCCGCCAAGACCCACCAGGCCATTGTCTAC
CTGCGACAGATTGACCCCTTTGTCTTTAACCTGGTGCGAATCATCAACTACTACATTCTG
ACCCGGGGTCTGTTGACCGTCTTCCCCTTTGTGGCCTCCTGGACCTGGGGTCTGCTGCGG
GCCAACCGACAGGCCATTGTCCTGAACGCTGCCTACGGCGACCTGCCTCTTTTCAGCGGC
GCCGCTCTGGTTCTTCTTGCCATCTACGCTCAGATCTAAGGATTGAAGCTATCATATCAA
GACTAACGATGGGGGTGGGAGTGGACACGTGATGACGATGAAGAGATGCCCATCGCGTGT
TGGACGCCGAACAATTTCGCTCAATGGCTTTGCTACGATCCATTTCATGTTTGCAGAAAA
CGAGCCATAGACTTTTGTATTTTTATGTGTAAGATTAATCGATTAATAATAGGATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06864g_CDS-001

Protein length: 353 aa.
Product: Conserved hypothetical protein

>YALI0C06864g_CDS-001 MSQFTKLQYMKKAELMNLAQSLDLADEGTKNDLEDRITRALSARRLELEATDEFNFLYTS
SPRKRIARAPRVPAAVQPDVKVSSLDADDEDDDEDDDDEDDEDEEDDEEEEDSEPTETLA
EHWARWKEVVGGHVEDLYREVEFQVEEAVSFVRYQLSTVESATIFALLIELYYLFVQLIP
FQLGLRWGRIPTRVGHSLIQHLEDGGHHVVKAGWFDLNDWFPLHVVQTPDFSVLLQCKTW
STLVFWAVGAIALPATVAYFVNFTATKKKTPAKTHQAIVYLRQIDPFVFNLVRIINYYIL
TRGLLTVFPFVASWTWGLLRANRQAIVLNAAYGDLPLFSGAALVLLAIYAQI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG