YALI0C06710g

Overview

Description weakly similar to Yarrowia lipolytica uniprot|Q6C6E1 YALI0E10241g, unknown function
Locus type CDS
Locus tag YALI0C06710g

Location

Species Yarrowia lipolytica Positions 895822..897601
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1780 (nuc.)
Previous locus YALI0C06671r Next locus YALI0C06732g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06710g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06710gYALI0C06710g_mRNA-001YALI0C06710g_CDS-001

Nucleotide sequence

 

>YALI0C06710g
ATGACTACCATTGCTATCGTCACAGTGCCACGAATGACACTCCCGGTGGAGCTTTGTTTG
CAGCTATTTCATCTCTGCGACTTGGAGAGTTGCCTTGCGCTCAGTGAAAGCTCTTGCACC
TTCTTCCACGTCTTTGAGGGTCTAGACGACAGTCTGATCCGATCCAAGGTCCAGAAACGA
GTGCCTTGGATGACCCTCGACGAATCAGGCACCCAAATTTACACCTGGGCTAGAGCAGCT
CGTTTGATCCGATCTCGAACCTCTGGAGTCCGCTCAAAATCACCCAAGTGGAAGGTGGTG
AAGAACCTGAGACCCTTGTTGTCGGTGCACCCAGTCGTTGAATTTCTGCCCACGGTGAGC
ATCGACACTAATCTTCCAGACTCGTTTGAGCCCATTTTCGACGAAATTGATCCTCGTCAT
GAACCATACAAGTTCCAGGGCGAACACTTGTGTGTTGGCGACATCTCTATGAATCTCAAG
ACTCTCAGAAAGAGTGTAATCTCACCGGCAGAGTCCAAACGACCAAAGCAGCTTTCGCAA
ATCTTCGACGATAGACCAGATCACAGTACAATGGTTATTCATGAGGATGATCCCGTGGGA
CAACGGCTCTGGTTTTCTGGGGAGAATTCCACGACCATTCATCTCACGGAACAGAGAAGA
GGTCACATGTACTCGCAGATCGACTACTTGATCGACAAGCCTGGATCAACGTTAGAGGAT
GGATCCATTGGCTTCGATCCATGCTCTTCGGTGGCGCTCCCACTTATTCGAGATGATGGA
GCTAATGGCCACTATCGAATCAAGATGTTGCCTGCGCCTTTTGGGGGAGCTTTCATCGTG
GAGTACTCGACGCCCACACTTCGTATTTCGTACATGGACCCCAATCCGTATGAAAACAAG
GTGGTTCTGTTGGCCAAACTGGAAGGCCACACTATCACTACCTTCCCGGTGGATATCCAG
ATTGAAATTTACAATGGCTTGCTCTACTTCAACGTGGATGGCCAGTTTGTGCGTCTATGG
GTTGATTTGGGGTTCCAGAAACGCCAGACTTACCAGCAGTTCACAAAGCTCAATGTCAGC
ACCGAAGTAAGAGGATTCTACCAGCAAAGAAAGTACACTCGTGCCCTGAGTGCCACCCGA
ACTGACTGGGCCCCTATTGGTATCTACACAGAGACCACAGGACATGCCGACTTGGATCCT
CGGGGGAAGGAGCGATATGTGACAGCATCCAACTCGGATCCTTTCTATGTCGGTGATCTA
CTAACTGGCAAGACCTTCGTGGCCAAGTATGGAGACGGAATGCCTGTGGTACATTTGGCT
GGAGCTTCGGCTGATTCAGATACGCCTGTGTTCTATGAATGGGCTATGGATGACTTTGAG
GGACTGTGTGATGATCTGAGAGCCAGCTCAGATACCCAGCCAACCCAGTCTAGAGAAGAT
CTGTGCACCACCATCACTATGCACGACTTTTGGTCTCGCATTCTCCGCATGGATGTGGAT
ATGGAGAGAGTCGTCATGACTCTGAGACATACAGATAACGTCACTGTTGGTTATGTGGGG
TTGCAGGGGCAGAGTTTGGGCGACGAGGATGACAAGCAAATGCCAGTCCCATGGAGAGAA
GGTGCGTTTGGCAAGGTGGAGATGTTTGAGGCTGTGGAAGTTATAGATGATGAGCTTGAG
CAGGAGGCTGAAGAGGAGAGGGTGGGTTTCAAGGTGTGATTGTGATAGTAGAAGGATTAT
TTATTGCTTATAGCTTCTCAAATGTATTGATATATGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06710g_CDS-001

Protein length: 573 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0C06710g_CDS-001 MTTIAIVTVPRMTLPVELCLQLFHLCDLESCLALSESSCTFFHVFEGLDDSLIRSKVQKR
VPWMTLDESGTQIYTWARAARLIRSRTSGVRSKSPKWKVVKNLRPLLSVHPVVEFLPTVS
IDTNLPDSFEPIFDEIDPRHEPYKFQGEHLCVGDISMNLKTLRKSVISPAESKRPKQLSQ
IFDDRPDHSTMVIHEDDPVGQRLWFSGENSTTIHLTEQRRGHMYSQIDYLIDKPGSTLED
GSIGFDPCSSVALPLIRDDGANGHYRIKMLPAPFGGAFIVEYSTPTLRISYMDPNPYENK
VVLLAKLEGHTITTFPVDIQIEIYNGLLYFNVDGQFVRLWVDLGFQKRQTYQQFTKLNVS
TEVRGFYQQRKYTRALSATRTDWAPIGIYTETTGHADLDPRGKERYVTASNSDPFYVGDL
LTGKTFVAKYGDGMPVVHLAGASADSDTPVFYEWAMDDFEGLCDDLRASSDTQPTQSRED
LCTTITMHDFWSRILRMDVDMERVVMTLRHTDNVTVGYVGLQGQSLGDEDDKQMPVPWRE
GAFGKVEMFEAVEVIDDELEQEAEEERVGFKV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG