YALI0C06556g

Overview

Description similar to uniprot|Q8WZU4 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0C06556g

Location

Species Yarrowia lipolytica Positions 878513..881362
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2850 (nuc.)
Previous locus YALI0C06534g Next locus YALI0C06578g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06556g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06556gYALI0C06556g_mRNA-001YALI0C06556g_CDS-001

Nucleotide sequence

 

>YALI0C06556g
CTAGTTGGGCCTTACACTGTGCGATATTGTTGACCAAGAGCCGATACAAACATTCCGTCA
CGCGACACAAACAACAACTGACTCAGACGACACGTTTACAAGTTAGCCGCAGCCACTTAT
CCCCCGACACAAGCCGCCCTGTTGTTACTCTACCAGTGACTTCGCAGGGTAAACAAAACA
GCTTGACGATCTCCAGGAAGTCTCTGCCAGATATTTGCATGTGAGTATCGCGAGAGAAGA
TGAGAGGGGTACCGAGGAGATGGTGTTTATGGTGCGACTTGCACATAGCTTCGATGCTAG
AGGCTGTTGTGAGGTTATGATACAGCTGAGAAGAAGCAGAGGCTGCGCACAGGGCTGGGT
TGAGAGAGCCCGTGACAGGGCTGGAGTGACCGGGCTGAAGCTGCTACTTTGTCCCCTCTG
TTCTTCTCCCTTGGTTACACCTCTTCAGCTACAGTGGTGACTCTGATCAGAACTTCAGCC
TCGTATAGGAAAACTCTTAATGGCGCCTCCCACAAGCACACAACTAACCCAGAACCGATT
TTGAGCCCTGCTCATCGCATTTAACAAACACTACGTGAGTATAAGAGAGGAGGATGAGAG
TGAGGATATGGAGGAGGCTTGGCTATGTTGCCTGCGGTTATCTGAGAGTGCCTATCAGAG
TGATATTGAGGGTGCGGCACATGTGAGCTTGACTGAGATGAGAAAGGGGTTCATGAGCGG
CCACAAGACACTACGTCTGCAGCATCCGAAAGGGCTTTAGTACGCACCCTCTCTATCATA
CCTCTTCGGGCGGCAATGTGAAGGGCGTACATGGCACTTGCTCCGGCAGCACCAGGGAGC
AGACAGCGGAAAGACAGATGATGGCACGCAGCACTGACGGCATAGTGTGATCAAGAGCCC
CATACGGAGCTCCCCCGGCAACGCTCACCTTTGATCTTAAGTTCGGATACGGGGGAGGTC
TTATTAGAGGGCCAGACCCCTACTGCATGTCCGCCTCTGTCTCTGTCAGCCTCTGGGTCT
GTCGCATTCTCTCGATTAGGTCACTTTATGGCCGACCCAGCTTTCCTACACTTCGCAGGT
TCGTGCGTTGAGGCTCGTTATACTAACCCAGAATGTCCGAATCATCGCCACCCCCCAACT
ACTACATTCCGGCATCGGTGAACATCACCTCACTCCCCCCGGAAGTGCTTTCCAAGGTGA
TGCAATGGGCCCTCCCCTCGGCAGACGCCGAATCAGGCAACTCCGGAGAGACCTACTACA
GCCAGACCAACTGGCTGGCCAAATGCATGACCACACACTCTTCTTTCTACAACGCCGGCG
TGCCTCTATTGTACCGCCATGTGGCTTTCTCGCACTCTCTTGAGTTTGACCGGTTCCTCA
AGTCCATCTTGGAAACCGGCTATGGCGTGCTCGTCAAGTGTCTGGATTTCTCTGATTTCA
CGTCTGTTGGACTGGGCCGAACTGCCCGAATGAACCAGGAAATCCAGTACGTGACAGCAG
AGACAATCTGCCATGCTCTGGAGCTGTGTCCGAATCTCGCCGAGTTTCTGGGCTCCGAAT
CCATTGGAATGGACATGTCTGCTAAGGTGCTGACCCGTCTGCTCTCCATGCCCTATCTGG
AGGCTCTAGACTTCTGTGGAGCCACTCATCCGACCTTTACCCAGGGCTTCATTGAAGCCA
TGAACTTTTACGCGCAGCAGGAGGTTTACTTCCCCAATCTCATTCGACTGTCTTTCCACG
CATGTTCGAATCTTTCCGACGACATTTTCCAAAAGCTGCTTCCCCGACTTCCAAATCTCG
AGCAGCTTGATCTGACACATACCCAGGTGAAGTCCGCATCTCTGCTTGACATTCCAGCCT
CTGCCAAAATCAAATACCTGTCTCTGGCACGCTGCTACCATCTTGACTCACAGGGACTAC
TCAAGTTTCTGGTCGTTCATCCTGCAACTCGGCAGCTGGAGTGGCTGTCTCTCATGTTTG
AGGCCACCAAGCCCTCTCCCATTGCCGCACGTGATTTTGATATCATTCTCAAATACCTCC
CCATGGAAACTCTGACGACTCTGAATCTGCACGGCTGTCTGCCGGTCAACCAGACGCATC
TGGAGCTCATCTGCTCTCTCAAGAACCTCGAGTCGCTCAGTTTGGGCTACACAAACATCC
CGTTTGAGTGCCTACGCAAGCTGCTTCCTGAGCTGCCACACCTCAAGTACATTGATATCT
CCGGAAACCCTTGCATCAACCAGTGGTCTATTCAAGATACGGCACTACTGAACGCAAATC
GAAACGTGGAGATGTTTGAAATATCATCCGATGTTCTCTCTCGTCTCACAGGTGTTCGAA
TCCCTGGCTTCTGTGTCCTTCAAGGACAGGGTAACCGAGGTTGGGTCACTCGAGGAGACG
ATCCTCCAACCCCCCGAAGACTCGCAGCCACTGGAGAGTCTCCCCTCAGCAGCTATCTGC
ACACGGTCCCCCAGGTGACCAACAATTCCGAAACACATGCCACTTCGCAAACTGTGGCTC
CTCCAAAGTTTTCCTTCTCGCAGTTTGCTCAGGCCAAGATCGAGCAGAGCAGCAAGTCGC
CTCCCGCTCGACGGTCGCCTGGAATGCGACCCATTGTGTCAACTAGCACGGCGTCTTCTT
TCCGAAAGGTCAAGACTCCCATGATGGTGCTCAACATGGACATGGGTTCGTCCATCTGGA
TCAAGGCCAGTCGTAAAATCAACATGTGTCAGGTTGGCATTGGAGGTCTCAGCACCTCCG
ACGCCGTCAAGGAGCGTGGTATTTATTTGTACTATGCTTTTAACAAGTAGAAATTATTTA
TAATGAATGATGATATGATTATGAAAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06556g_CDS-001

Protein length: 566 aa.
Product: Conserved hypothetical protein

>YALI0C06556g_CDS-001 MSESSPPPNYYIPASVNITSLPPEVLSKVMQWALPSADAESGNSGETYYSQTNWLAKCMT
THSSFYNAGVPLLYRHVAFSHSLEFDRFLKSILETGYGVLVKCLDFSDFTSVGLGRTARM
NQEIQYVTAETICHALELCPNLAEFLGSESIGMDMSAKVLTRLLSMPYLEALDFCGATHP
TFTQGFIEAMNFYAQQEVYFPNLIRLSFHACSNLSDDIFQKLLPRLPNLEQLDLTHTQVK
SASLLDIPASAKIKYLSLARCYHLDSQGLLKFLVVHPATRQLEWLSLMFEATKPSPIAAR
DFDIILKYLPMETLTTLNLHGCLPVNQTHLELICSLKNLESLSLGYTNIPFECLRKLLPE
LPHLKYIDISGNPCINQWSIQDTALLNANRNVEMFEISSDVLSRLTGVRIPGFCVLQGQG
NRGWVTRGDDPPTPRRLAATGESPLSSYLHTVPQVTNNSETHATSQTVAPPKFSFSQFAQ
AKIEQSSKSPPARRSPGMRPIVSTSTASSFRKVKTPMMVLNMDMGSSIWIKASRKINMCQ
VGIGGLSTSDAVKERGIYLYYAFNK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG