YALI0C06460g

Overview

Description some similarities with uniprot|O94186 Pneumocystis carinii Mitotic inducer phosphatase Cdc25
Locus type CDS
Locus tag YALI0C06460g

Location

Species Yarrowia lipolytica Positions 858825..861394
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2570 (nuc.)
Previous locus YALI0C06446g Next locus YALI0C06468r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06460g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06460gYALI0C06460g_mRNA-001YALI0C06460g_CDS-001

Nucleotide sequence

 

>YALI0C06460g
GGTGAGTGAGGATCAGGGTGAGGTGAAGGCGAGCGAGGGCGATTGAGGTTGGTCATGATC
TCCTCGCGGTCCGCATAGTCTTGTCGGGGTGGTCATGGGTTAGCTATGGTCTTGTCGAGT
TAGCATGGTCAATGGTTACTGGTCGGTGACATGATCTCTGACCATGCAATGGGTCCGAAG
AACCGCTGCGAGCACGCGTGCCTGCTACAGCTCCTACCTGCTACGCCATGTCTCACACAA
CGTCTCCAACCGCTGCACCAGTTGTACTCGACATTGCCAATATGTGGTTGGCCCAACAAC
CAAGTCTAATTCTAATGGGCAAAAGGCAAACATGCGCCAGAGGAAACCAGCTCACAAACT
TGATCTCCTATCCACACTAACACAGGATGCAAAGTGTGACTAGTCCACTGTCACGACGGC
ACATGTTTGACGACTCGCCGTCCTACAAGCGCAAGCTGGTTTCGCCGGCCTGCATGGCGG
GAGATCTCACCGCTGCCGCCGTTCATATCGAGACGTGAGTATGAAACCAGGAGAGGGATA
GGCGGGGTTAATGGGGATGATGGTGATCAAATCGCTCTGATTCTGAGCACATGTCCCATC
ATGAGTCCCCATCATGAGTTCCCACCATGTGTTGCAGACTGTATGAACCTGAGCATTTCC
AGCCAAGTCACAATGCGCTGACAAGCGGGGGTTCTGTGAATCGTTATCGTTACCACGTTG
CTGTAACAATGTCAACACAGAATACCATTGGGAATCAGCTGGACTTTACTCATGACATCA
AGCACCAGACTGTCTCCCCCAGTTAAGCCCTTTTTCTTTTCTCACCACTGTAGACTTCCG
TTTACATGGGACACGCACACGCAGACAGCGTGCAGTTAATTATCACCACTAACGCAGACC
CACCTTGCCCACTCCAAGACGCTCGCTATTCACCGCCAAAACCCCTGCATTTCTCAACCT
CCCTCCCCCAAACGACTCCTCGACGCCATGTGGAGTCCCCATGAAGAAGTCAATGAGCAT
GATGGAGCCCATGTCGCCGCTGTCCGCTGGCTCGGACGGTAGCACCACCTTTGGCAGTAG
CACCAGCAGTAACACCAGCAGTAACACCAGCACCAGCAGCATCCAGATGCACCGGCTACG
AAAGAACAACCGCAGCACCAGCAGTCTGCGGCTCACCAGCGCCGGCGTTTCGTTCGACCC
CATTGACGAGGAAGGTAGCTTACGTAAGCCGTTCCGTTTCTCGCTTGAGCTGGACTCGCC
TGCCAACACCCGCTTCACACACTCCATGAATGAGGCCGACAGCAGCATGGACACAGACGA
GGATGGCCTTGGTAGCTTGTCTCAGAACTTCCGTTTGGGAGGAAGCACCAGCCACTCCAA
CACACATAGTCTGAACTTTAACGGCTTTACGCTCGGCGGCGCGGCAGACGAGAGTGCGGG
TGCTGTTGCCGCAGCAGATGTCACCGCTGACGACATTAACGATACGCCGTCAGCGCGGCC
GGTACGGCCCTCTCTCAACCCGCTATGCAAGCGGTCATACAACTCGTCGTCCACGCCATT
TGCTGCCAAGTTCAAGCGGCCCCGACGAACCCACTCCATGTTCCAGGACCCCAAGGAGCT
TATGCAGGAGGAGCTGGACGAGGAGAAGGAGATGGTTCGACGCCTTTCGCTGTCGCCCGA
CGTTAATAACAACGTGGACTCCTTTCTTGTGTCCGCTGACTGCACTCTGGAGTCGTTTTC
CGTCGAGGGCGATCCCTTCCGACGCATCAAGCGAGAGACTCTGGTCCAGATTCTGGACGG
TCACTATTCGCATTACTACGATCGCCACGTTGTGATTGACTGCCGGTTCGAGTACGAGTA
TGATGGCGGCCACATTGACGGCGCCATTAACATCAACTCCAAGGATCGACTGGAGGAGCT
GCTGTCCAACGAGGAGGGCATTCTCGGCAACAACTGCAACAACATGATGCGGCCCGGCAA
GCGGGGCGGAGACTCCCGGAAACGTACTCTGTTGATCTTCCACTGCGAGTACTCTGCTCA
CCGAGGCCCGCGAATGGCCATGCATCTGAGAAACCGAGACCGTCGGCTCAACATGACTAA
CTACCCGCACCTGAACTTTCCCGACGTGGTGATTCTGCAGGGCGGCTACAACCACTTTTT
CGAGCAGTTCCATACACGGTGCTACCCTCCCCAATACGTCGAAATGAACGATTCCATGCA
TAAGAGCACCTGTGAGAGAGAGATGGGCCGATTCCGGCGTCACATGAAGCTACGAAGCGA
AAGCTCCATCAACAAGCAGCAGGGCGTCATCTGTTCGCCGGTTGGGTTGTCTCGTTCGCT
GAGCGAAAACGTAGACTATCATCGACCCAAGCGGGTGGTGAGTTGCCAGCTGTGGCGATG
ATGTGCATCCAGAGACACTTGCTTCGATTGATCAATTTCCACACAGGTTTCTGTGGGGCA
GCCTTGATGGTTGTCCTTCAGTGTCTTCTGAGATCCTGCAGCGGTCCAGAGACATCAAAA
GAACACTGATATAAAAGTACTGACAATAATACATTATACCCACTACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06460g_CDS-001

Protein length: 544 aa.
Product: Conserved hypothetical protein

>YALI0C06460g_CDS-001 MQSVTSPLSRRHMFDDSPSYKRKLVSPACMAGDLTAAAVHIETPTLPTPRRSLFTAKTPA
FLNLPPPNDSSTPCGVPMKKSMSMMEPMSPLSAGSDGSTTFGSSTSSNTSSNTSTSSIQM
HRLRKNNRSTSSLRLTSAGVSFDPIDEEGSLRKPFRFSLELDSPANTRFTHSMNEADSSM
DTDEDGLGSLSQNFRLGGSTSHSNTHSLNFNGFTLGGAADESAGAVAAADVTADDINDTP
SARPVRPSLNPLCKRSYNSSSTPFAAKFKRPRRTHSMFQDPKELMQEELDEEKEMVRRLS
LSPDVNNNVDSFLVSADCTLESFSVEGDPFRRIKRETLVQILDGHYSHYYDRHVVIDCRF
EYEYDGGHIDGAININSKDRLEELLSNEEGILGNNCNNMMRPGKRGGDSRKRTLLIFHCE
YSAHRGPRMAMHLRNRDRRLNMTNYPHLNFPDVVILQGGYNHFFEQFHTRCYPPQYVEMN
DSMHKSTCEREMGRFRRHMKLRSESSINKQQGVICSPVGLSRSLSENVDYHRPKRVVSCQ
LWR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG