YALI0C06424g

Overview

Description similar to uniprot|P10870 Saccharomyces cerevisiae YDL194W (ohnolog of YDL138W) SNF3 high-affinity glucose transporter/regulatory protein
Locus type CDS
Locus tag YALI0C06424g

Location

Species Yarrowia lipolytica Positions 852842..854459
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1618 (nuc.)
Previous locus YALI0C06391g Next locus YALI0C06446g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06424g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06424gYALI0C06424g_mRNA-001YALI0C06424g_CDS-001

Nucleotide sequence

 

>YALI0C06424g
ATGGGACTCGCTAACATCATCAACCGTGGAGAAAAGCCCGAGGGCTCGGCCTTCATGGCG
GCCTTTGTGGCCGTGTTTGTCGCGTTTGGAGGTATTCTGTTTGGATACGACACTGGAACC
ATTTCCGGCGTCATGGCCATGCCATTCGTCAAGAAGACCTTTACAGATGACGGCCTGGAG
TTCACTTCTGAGCAGACCTCGCTCATCACTTCCATTCTTTCTGCAGGCACCTTCACTGGA
GCCATTTCTGCTCCCTGGGCCTCTGATACTCTGGGAAGACGACTGGGTCTGATCCTCTTC
TGTGTCGTCTTCTCTGTTGGCGCTATTCTTCAGACTGCTGCCACCGGCCGAACGCTTTTG
ATTGTCGGACGAGTTGTTGCTGGTCTTGGTGTTGGTGGAGTCTCTTCCATCGTTCCTCTT
TACCAGTCTGAGGTTGCCCCCAAGTGGATCCGAGGTGCCGTTGTCTCCATCTACCAGTTT
GCCATCACCATTGGTCTTCTGCTGGCTGCCATTGTCAACAACGCAACCAAAAACAAAGAC
AACAGTGCTTCCTACCGAATTCCTCTCGGCCTTCAGCTTCTGTGGGCCGTCATCCTGAGT
GGAGGTCTCATCCTGCTACCGGAGACTCCTCGATTCTGGATCAAGAAGGGCGAGTACGAC
AAGGCCGCCGATTCCCTGCGACGACTACGACGACTTCCTGTTGAGCACGAGGCTGTACAG
AAGGAGCTCCTGGAGATCCAATCTTCTCACGACCACGAGATGCAGATCGGTAGCGCCACC
TGGGCCGCCTGCTTCTCCCCCAAGGGGTCCCAGCTGAAGCGAATGCTGACCGGTATTGCC
ATTCAGGCCCTGCAGCAGCTCACCGGTATCAACTTCATCTTCTACTACGGAACCGAGTTC
TTCAAGAAGTCCAACATCTCCAACCCCTTCCTCATCCAGATGATCACCAACATTGTCAAC
GTGGTTATGACCATCCCCGGTATCATGTTTGTTGATCGAGTCGGACGACGAAAGCTGCTG
TTGATCGGAGCTATCGTCATGTGCTCTTCCGAGTTTATCGTGGCGGCTGTTGGTACTGCC
ATTGATAACGAGACCTCCTCAAAGGTTCTGATTGCCTTCACTTGTACCTTCATTGCCGGT
TTCGCCGCCACCTGGGGTCCTATTGCCTGGGTTGTCATTGGAGAGATTTTCCCTCTACGA
ATCCGAGCCAAGGGTGTTGCTCTATGCGCCGCCTCCAACTGGCTTTTCAACTTTGCCATT
GCCTTTGCAACCCCCTACCTCGTCGACGAGGCCCCTGGATCGGCCGGTCTCAAGACCAAG
GTCTTCTTCATCTGGGGAGGCTGCAACTTCCTGTGCATCGCCTTCACTTACTTCTTCATC
TACGAGACCAAGGGTCTTACTCTGGAGGAGGTGGACCAGATGTACGCCGAGATCAAGATT
GCTTCTCGATCCCACCAGTTTGTGCCTACCACTCGAGTCGCTGCTTACGACGAGCACGCT
TCTGACGACAAGAAGGACGGACAGCACGTCTACATTGAGTCTGTCTAGACATTGCAACAA
CACTATAATGCCCTACGAACGAATAATTTAATCACTAATTTATATTCAGAAGATGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06424g_CDS-001

Protein length: 516 aa.
Product: Plasma membrane low glucose sensor, regulates glucose transport, putative

>YALI0C06424g_CDS-001 MGLANIINRGEKPEGSAFMAAFVAVFVAFGGILFGYDTGTISGVMAMPFVKKTFTDDGLE
FTSEQTSLITSILSAGTFTGAISAPWASDTLGRRLGLILFCVVFSVGAILQTAATGRTLL
IVGRVVAGLGVGGVSSIVPLYQSEVAPKWIRGAVVSIYQFAITIGLLLAAIVNNATKNKD
NSASYRIPLGLQLLWAVILSGGLILLPETPRFWIKKGEYDKAADSLRRLRRLPVEHEAVQ
KELLEIQSSHDHEMQIGSATWAACFSPKGSQLKRMLTGIAIQALQQLTGINFIFYYGTEF
FKKSNISNPFLIQMITNIVNVVMTIPGIMFVDRVGRRKLLLIGAIVMCSSEFIVAAVGTA
IDNETSSKVLIAFTCTFIAGFAATWGPIAWVVIGEIFPLRIRAKGVALCAASNWLFNFAI
AFATPYLVDEAPGSAGLKTKVFFIWGGCNFLCIAFTYFFIYETKGLTLEEVDQMYAEIKI
ASRSHQFVPTTRVAAYDEHASDDKKDGQHVYIESV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG