YALI0C06347g

Overview

Description similar to uniprot|Q870Q4 Neurospora crassa B1D14.310 Hypothetical protein
Locus type CDS
Locus tag YALI0C06347g

Location

Species Yarrowia lipolytica Positions 822399..824691
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2293 (nuc.)
Previous locus YALI0C06325g Next locus YALI0C06369g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06347g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06347gYALI0C06347g_mRNA-001YALI0C06347g_CDS-001

Nucleotide sequence

 

>YALI0C06347g
ATGGAAGACGGCGCAAAAGATGACTACATCAAGGACATCTACCGACACGCGTCGCCCAAC
GCCGACACAGACTCCTTCCTCGGCAGCCCCACCGTCGCCATCGACAGCACGCTGTCCACG
TCCAACTCTCTCAGCAACTTGAATCTCGACACCAACGACAGCAGCAGCTCGCCACCAGCT
CACAATGACGACGTGCCAGACATTGCCGAGGTGCTCCAGGAAATGCTCGCAACCACAGAA
CTGCCGTCGTCCACAACGGATCTGGACTACGAGCCTGAGCTGGACCTTGTGGGAGGCCAC
CGGCGCAATCTGGGCCAGCTGAACGACTACGGCAGCCCCAGGGCGGACTCGTTTGTGTCC
CTGGACCCGCCCAGCATCGGAACCGAGGTCGAGCAGTTTCTCTCCAAGAAAAAACAGTTT
TTCATCCTCTCCTCGGCCGGAAAACCCATCTACACCCTGCACGGCTCGGACGACGTGATT
CTCGGCTACCTGGGCGTGCTACAGACGGTGGTGAGCGCCTACCAGGCCGACGAGTCCGGC
GACAACCTCATGTCCTTTCGAGCAGGCAAGACCCTCGTAGTTGTTGCGGTCGAGGGACCT
CTGATCCTGGCGGCCGTGTCCAAAATTGGAGAGAGTGAGAGCCAACTCAGAGCCCAGTTG
GACGTGCTGTACACCCAGATTCTAAGCACGCTGACCAAGAACCAGATTCATCGAATCTAT
GCCAACCAGAGCAACTTCGATCTAAGAAACCTCCTGCAGGGCACCGACGTCTATCTGGAT
GCTCTGACCCGGGAAATCGTCAACGGAAGCCCCTCAATTCTCCTGGGGGCTCTTGAGCCG
CTGATCCTGCGAAAGTCCATCAGAGAAGAGATTGATGGTGTTCTTCTCAGCTGCAGAACG
CCCTCGCTGCTCTACGGACTGATTGTCTCTGACTCCAAGCTCGCCAACGTTATCCGTCCC
AAGAAACACTCGCTACATCCGCCGGACCTTATCTTGCTGTTTAGCATGCTTTTCAACACC
ACCTCCTTCCGCGATGGAGAGCACTGGGTGCCCATTTGTCTGCCCAAGTTCAACTCCACC
GGCTTCCTCTATGCCTACATCCACTTCTTCAGCAAGTCGTCTGCCCTGATTCAAATCTCC
GCCGATAAGAATGCATTTTTCGAGCTGCGTGAAGCCAAGCAGCAGATCCTGTCGCAGATG
GAAGATAAGGGTCTTATCAAGGCTCTGGAACGTGCAGAGGAGAGGGGTAGGTTCAAGCCG
GTGGATGTGGCGGTCCCCATGGTGAGGCACTTTCTGTACAAGAGCCGAGCACACGTGCAG
TATGTTATGCCGTCCTACGAGACGCACTACTACGAACCGCACATGCAGCGCGGGCTGCTA
ACGTTCTACCACCAGCTCCATGCTCAGGTGAACAGTGACTCGTCCCGTGGCTCCAACAAT
GGGTGGAGGTTTATGCACTTGGTGCGTAATTCCTGCATTGGGTTTGCGTGGATAACCCCC
TCTTTTGAGCTCTATTGTGTATCGGGACCTAACGTGTCGCGTGCCACGCTAGCCGCCTCC
ATCCACTCGATTGCCAAATGGGTCAGCCAGCACCGCGAGCGGCTATTTGTTATTGGAGGG
GCGGTTTTCTAGGGCAATTGGGCCCGCTTTTCTTCTCGAATTGGTGCACTGCTCTCTTGC
TTTCCCTCTCATTACCCATGCCTCCTGTATGCACAATGGCCAATCATGTTGTGTGCGAGT
CAGCATGTGTGACTGTGTCCGTCTGTCTGAGAGAGAGGGGTTTGTATGAGGCCCTAAGGC
ATGTGGAATGACGATCGCAAAGGGCCACATTTTGAGGCCGATAACGTTGCCCACGCCGTT
GACGCAGCAAACTCTCTGACCGAGCTGGGATAGCCGGGATTTGCATACCCTATGACCCCC
CTTCTTTTTTCCCTCGCTCCTCGGATTTAGTTGTGTTTGCCACTATCTTCTATCTTTGGA
GTTAAGGTTTGGGCAAGTGTTTCCCGGATTGGAACCTTCTAGCTATGCTTTGTTGTGGTA
AGTGCATGAGAGACGCACACAACGCCAGCATGACACAGCAGATAGTGCGGTTGGGACCCT
TATCTCGCGGCACATCCGGTGGGAGAAAGCAGCCCCATTGCTCTATATATAGGGTGGCGG
CTCCCACTTGAAAGAGGTATAACGAACTAGCGAAACACGAATCTACGAAAGTGATAGAAC
TACATACAGCAAGATACAAGCTACAGCGCTATTGCACACACACACAATTACACACACCAA
CATTACCAACATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06347g_CDS-001

Protein length: 544 aa.
Product: Conserved hypothetical protein

>YALI0C06347g_CDS-001 MEDGAKDDYIKDIYRHASPNADTDSFLGSPTVAIDSTLSTSNSLSNLNLDTNDSSSSPPA
HNDDVPDIAEVLQEMLATTELPSSTTDLDYEPELDLVGGHRRNLGQLNDYGSPRADSFVS
LDPPSIGTEVEQFLSKKKQFFILSSAGKPIYTLHGSDDVILGYLGVLQTVVSAYQADESG
DNLMSFRAGKTLVVVAVEGPLILAAVSKIGESESQLRAQLDVLYTQILSTLTKNQIHRIY
ANQSNFDLRNLLQGTDVYLDALTREIVNGSPSILLGALEPLILRKSIREEIDGVLLSCRT
PSLLYGLIVSDSKLANVIRPKKHSLHPPDLILLFSMLFNTTSFRDGEHWVPICLPKFNST
GFLYAYIHFFSKSSALIQISADKNAFFELREAKQQILSQMEDKGLIKALERAEERGRFKP
VDVAVPMVRHFLYKSRAHVQYVMPSYETHYYEPHMQRGLLTFYHQLHAQVNSDSSRGSNN
GWRFMHLVRNSCIGFAWITPSFELYCVSGPNVSRATLAASIHSIAKWVSQHRERLFVIGG
AVF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG