YALI0C06215g

Overview

Description similar to uniprot|Q871G3 Neurospora crassa B7H23.180 Hypothetical protein
Locus type CDS
Locus tag YALI0C06215g

Location

Species Yarrowia lipolytica Positions 806050..807062
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1013 (nuc.)
Previous locus YALI0C06193g Next locus YALI0C06237g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06215g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06215gYALI0C06215g_mRNA-001YALI0C06215g_CDS-001

Nucleotide sequence

 

>YALI0C06215g
ATGTCTAACCTACTGGTATTCGACAACTCGGTGGTCACCGACGAGGCGCTGGTGGCCAAC
ATCATGGCCCAGAACCAAGGCGCATCGCACCAGCTGCTGGAACGAATAGGCACCCAGGTC
CAGCTACCAGCAAACACATACGCCTCCATCCAGGTGTTTACAAAGTCGCCACAGCCCGTG
ACTCTGCCAGCATCATTGCTGGAGACGCTGAGCGGCGCTCTGGCGCCCGGAGGAGCTCTG
TTCGGTGCTGTGGACGGCTCCCAGGTCATGGACTTCATCATGGCGGGTCTGGCCCAGGAC
GGCGACAAGTGGGTCAAGCCTGCCGCCACAGGAACCACGCTGCTCAAGAAGTCGGGAGGA
GGCCCCAAGAAGTTTGCATTCAAGAGAGCCAGTCCAGCAACTGCGGCTCCCTCGACCAAC
GGAACTAACCCCGCCGCTACCGTCAACCTCAACTCTGTCGTGACTCTATCCATGGACGAC
GACGACCTCATGGACGAAGACGACCTCATGGAAGACGACACCAACCTGTCCATGCCCATC
AAAATCCCAGCCAAGTGCGACCCTGGACCCGGCAAGAAGCGACGAAAGGCCTGCAAGGAC
TGCACTTGTGGTCTCAAGGAAATGGAGGAGCAGGCCAAGGACGCCCAGCTGGCAGCACAG
AACACCGTCACTCTGTCTGCCGAAGATACTGCCGAAATCGACTTCACAGTGCAGGGCAAG
ACTGGAGGATGTGGATCGTGTGCTCTGGGAGACGCCTTCCGATGCGACGGATGCCCCTAT
CTCGGTCTGCCTCCCTTCAAGCCCGGAGAGGCTGTTAGTATTGGAGGAGCCAGCGACCTG
TAAGAAGCAAACAACCAACTTCAACAACCGACTTCAGCAATCGACTTGTCTTACGAGTCA
ACACAAAACATCAAAATCAAAAGTACAGTACCCGGTGCATACCATCTAACCATATAAGTT
ATATACATGAAAAATCATATAGATAATGATAAGTTATTGCAGTTAACTGAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06215g_CDS-001

Protein length: 281 aa.
Product: Conserved hypothetical protein

>YALI0C06215g_CDS-001 MSNLLVFDNSVVTDEALVANIMAQNQGASHQLLERIGTQVQLPANTYASIQVFTKSPQPV
TLPASLLETLSGALAPGGALFGAVDGSQVMDFIMAGLAQDGDKWVKPAATGTTLLKKSGG
GPKKFAFKRASPATAAPSTNGTNPAATVNLNSVVTLSMDDDDLMDEDDLMEDDTNLSMPI
KIPAKCDPGPGKKRRKACKDCTCGLKEMEEQAKDAQLAAQNTVTLSAEDTAEIDFTVQGK
TGGCGSCALGDAFRCDGCPYLGLPPFKPGEAVSIGGASDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG