YALI0C05995g

Overview

Description weakly similar to uniprot|Q9P6Z0 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0C05995g

Location

Species Yarrowia lipolytica Positions 772677..775615
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2939 (nuc.)
Previous locus YALI0C05984r Next locus YALI0C06017g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05995g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05995gYALI0C05995g_mRNA-001YALI0C05995g_CDS-001

Nucleotide sequence

 

>YALI0C05995g
ATGGATCAGAAGACGGGCTTTTCGGCCATGCCTCGGGCGACCCCGGAGTACGGCAGTGAC
GGCGAGCAGCCCAAGAAACGGCCCCGAAGATCGCGCAAGGGCCTGGAGAAATCATTTGCA
TGCGAAGAACCCGGCTGCGACAAACGGTTCACCAGGGCAGAACACCTGTCCCGACACCAG
CTCAACCACAGACCCAAGGAGATCTTCCCGTGCCAGTTCCCAGGATGCACAAAGACGTTT
GTGAGAGCAGACCTACGCTCCCGACACGCCCAGCGCCACGAGAAGGGAGATGGGGGCTAC
GGAGTTAAGATGGAAGACGATCTGCCCGAGTTGAAACAGCCAGTAGTACAACAGCAACCA
GCACAAACGCAGCCATTATCAGGAGGACCAGCGCTAGGAGGAGGTCCGCCAGGAGCTGGA
CCGGGAGGACAGAGCCAGGGTCAAGGACCCCACGGACTTAGTCCAGGAGGACAGACACCG
TTGCCTTTACCAGGACTAGGAGCTCCAATGGGACACATTCCCACCACGAACATGGCCAGT
GTAAACAATCCACCAATTCCGTCACTAGGCTACCTACCTCCCCAACCTCCTCTCGGACAA
CACGCTCTGAGTCCAAACGGACCGCCAAACGGCCCCCCTAGCATCCCTAACAACAACATT
TCTAGCATGCCCAATGTGCCTCCGCAAGTGCCTACTCAAGGAGGTTCTGCTCCGCTTAAT
TCTGGCATGATGAATCCGGGCATGTCCAACTACCTGCCTGTCAACAGTCCTGGAACAGGT
ATTGATATGGACAACACTCTTCCCCCTCTCAGCAACAATACTCTACTGGTTAACGCTCTG
GATATGGATATGCGCTCGAAACTGCACTCTACCAGAGCTTTACCCAAGCCCTGGCAACCC
GACGAAATCCCTAGTCCACGACCCATGTTCTCGTTTGATCAGATGACCGACTACGATTTG
AACGCCGAGTCATCGCAACTTTTATCATGGCTCTTTGGAGACTCGTCTTCGCTGTCCGAG
CAGTTTGACTCTCCCGCCTCCCAGGCCACTTTTTCGCCTCCCTCGCCAATGGCAGAAGAC
CTGACCATCTCCGAGGAGAAACAAAAGGAGCTTATCAGCGTGATCCCATCGATAGCAGAC
GACCCTAACATTGTCAACTTGTCCAAGTACTTACTTCGATTCTGGGATGTCATTAATGCC
CAAATTGACGTGATTCACCGAGGCACTTTCCGAGTCAACTCATCCCCTCCAGGCCTACTG
TGGTCCATGATTCTCATGGGAGCTGGCCTGGACGGTAATCAGACGTTTGCAAACAAAATT
AGTCATCCCCTCCGATGGATTCTGTTTGCATCTCCTGATTGTCAGCCGCCTGCAAAACTG
TGGGTCTTCCAAGCACTCATGATTCTCGAGTGCTACGAGAAGATGTACACAGACCGAATC
CTACACGAACGAGGCCACGTGCACCATGCCACGACCATCCAACTCATGCGACGATCCTCC
GTCTTTATGGGCACCATTGACGACCACTTTGACTACTACGATTCCGCAGATAGCAGAGAT
ACCAGTATTTATGATCAGCGAATCAAGGTGGAGTCGTTCAAGCGGGTCGCCTATCTCGCC
TTTTGTCTTGATGTACTTCATTCCGTCACTTTTGGACACACTCCCGCTGTTTCAGCGCAC
GAAATCCGACTACAATTGCCTGATGAGGCGTTGTGGAACAGTAGTGAGTCGTTCGACAAC
AATGGAGACCGGACTGATGCAGTAGATACCCCCCTGACTCCATCAAGAGGCAAGCCAAGG
GCTCCTGGAGTTGGAAAGCCGCCTCCAACTTTCCTGTCCGCCCTCAAACGCGTGCTTAAT
AAGCAACATGTGGACGTGAAGCCCTTTGGACGCCACGTACTTCTATTTGGATTGATGTCG
GTCGCCATTCAAATGCAGCAGCGTGATTTGCAGGCCAGCAGTATTGGCTGGAAGAGTCGA
AAGCCGTGGAAGGAGATCTTGTCGCGCTCCTACGACTTTTGGGCACATGAGTATGGTCTG
GCGAATACTTGCGGTCCTCTTCCTCATTTGCATCCCCGCATGAACATTCCCAATCTCGGA
TTATCTATTGGAGAGTTCCCTCCCGATTTCCTCAACGCCTTCTCCGTGACTTTGCCCCAG
CAACAACAAGCTCTTTCCGATGCCCTTTCTCTTTCGGCTCTTCACATCTACCATCTTGGA
TCGATAGTGTTGCATCTTTCGCCGCACGATTTCCAGATCTTTGCTGGCGTGCCTCGAATG
TTGACAGTGAAAATGCGTCAAGCGCAGTACGACGCTACTAACGCTCGTATGCACGAATGG
GCACGTACCGAGCCTGGCAGTATTGCTGTTTGGCATGCTATTCGGATTCTCCGAGATGTC
TTCCTGGACGGACCTAACGAGCTCACGTACAAGGGACATCTTGATCCTGTGATTCAGCGA
CCTCACAGTGTAACCATGGCTGCCCTGGCTCTCTGGGCGTTTGTGTTTGTCAACTCTGGA
TGTGAGGATCATGCCATGGCGTTGTACAAAGATCCCAATGTTCGGCTGACGGCCGAGAAG
GGCAAGATCACCGAGTGGGGCTCAGAGATGCTCACGCGCAGCGAGGAGCGGCCCATCAAC
AGCTATGTGCCCAAGGAGGATGGCTACGAGTATTTGAAGCGGCTGTCGGGTCTGTCTCCT
GTTGAGATCCGAACAGCCCCGAACCTGCAGAACATCATTGGTCTGTTGCAGGTGATTTGG
AAGGCTATTGAAAAGGTGCAATGGGAGATTCTGCAGGAGCTGAGTCGGCTGCTTCAGCAT
TGTATGGAGCGAAGCCGGGGCAAGCAGCAGCAAAAGTGCGACTTTATGGTCGTTTGGAGA
TCCAGATAGGATAGTAATGTATAATAATAGACGATGTGGGCACCAGCGCGAGATATAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05995g_CDS-001

Protein length: 963 aa.
Product: Conserved hypothetical protein

>YALI0C05995g_CDS-001 MDQKTGFSAMPRATPEYGSDGEQPKKRPRRSRKGLEKSFACEEPGCDKRFTRAEHLSRHQ
LNHRPKEIFPCQFPGCTKTFVRADLRSRHAQRHEKGDGGYGVKMEDDLPELKQPVVQQQP
AQTQPLSGGPALGGGPPGAGPGGQSQGQGPHGLSPGGQTPLPLPGLGAPMGHIPTTNMAS
VNNPPIPSLGYLPPQPPLGQHALSPNGPPNGPPSIPNNNISSMPNVPPQVPTQGGSAPLN
SGMMNPGMSNYLPVNSPGTGIDMDNTLPPLSNNTLLVNALDMDMRSKLHSTRALPKPWQP
DEIPSPRPMFSFDQMTDYDLNAESSQLLSWLFGDSSSLSEQFDSPASQATFSPPSPMAED
LTISEEKQKELISVIPSIADDPNIVNLSKYLLRFWDVINAQIDVIHRGTFRVNSSPPGLL
WSMILMGAGLDGNQTFANKISHPLRWILFASPDCQPPAKLWVFQALMILECYEKMYTDRI
LHERGHVHHATTIQLMRRSSVFMGTIDDHFDYYDSADSRDTSIYDQRIKVESFKRVAYLA
FCLDVLHSVTFGHTPAVSAHEIRLQLPDEALWNSSESFDNNGDRTDAVDTPLTPSRGKPR
APGVGKPPPTFLSALKRVLNKQHVDVKPFGRHVLLFGLMSVAIQMQQRDLQASSIGWKSR
KPWKEILSRSYDFWAHEYGLANTCGPLPHLHPRMNIPNLGLSIGEFPPDFLNAFSVTLPQ
QQQALSDALSLSALHIYHLGSIVLHLSPHDFQIFAGVPRMLTVKMRQAQYDATNARMHEW
ARTEPGSIAVWHAIRILRDVFLDGPNELTYKGHLDPVIQRPHSVTMAALALWAFVFVNSG
CEDHAMALYKDPNVRLTAEKGKITEWGSEMLTRSEERPINSYVPKEDGYEYLKRLSGLSP
VEIRTAPNLQNIIGLLQVIWKAIEKVQWEILQELSRLLQHCMERSRGKQQQKCDFMVVWR
SR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG