YALI0C05643g

Overview

Description similar to uniprot|O94397 Schizosaccharomyces pombe Hypothetical 38.6 kDa protein
Locus type CDS
Locus tag YALI0C05643g

Location

Species Yarrowia lipolytica Positions 720414..722373
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1960 (nuc.)
Previous locus YALI0C05621g Next locus YALI0C05665g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05643g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05643gYALI0C05643g_mRNA-001YALI0C05643g_CDS-001

Nucleotide sequence

 

>YALI0C05643g
ATGGTCGACAAGGAAAAAGCGACTCGAAAGCGCAAGGCGGCCAGCGACTCGAAGCCTGCG
GCCCGCAAGGAGAAAAAAGAAAAGGACGGCGACGACGTCAAGGCCCGAGGCAAGGCGTCC
AAGGCCGGCAAGGCTGGCAAGGCCACCAAGGCAACCAAGGCCACCAAAGAGAGTGAGTAT
TTGAGAAAGGGCGAGTGGAAATGTGGACAAGTGGACACGTGGACACGTGGAGCCGTTTGA
ACGGTTCGATTAGACCGGTTGGCGGTGATTTGGGCGGGTTCTGTGTGTGACTCGGTTGTT
GTGATAGGTTCAAGACATGATACAAGTGTTTGGGATACCTGAAGTGAGATTGATTGATAT
TGTGGGTGGTTTCGATTGTCGACATGGAGGGCATTTGATTTGGTTGGTTGATGAGACTGG
GATTCTGAGACGAGACATGAGTGTTGAAACGAGCTGAGATGGTGGATGTCGAGCGACTAT
CAGTGAAGCCGTGGCCTGGTTGGTGTTTGATTGGTGCTTGGTTGACGTCTGGTCTAATTG
GAATGGGAATTGTCGTTGGAACTGATATTCCCTCTGACTGTTCATGGCTGGTGTGTCAGG
CATGGGGTACGCTGCTCGGCACGGTTTCCAGTCGCCATTTTCTCAGCTGTCTCTCCGTGC
TTCATGATTCGCAATCTCAGCTCAAGCCCCATCGTCCTTCAGGACATTGGTTCACCAAGA
TCATACATCATTTCTCAACATGCCAGTCAAGTATATCTACCAGACAAAGCTCTTACCGAT
TCTCTCCAACGAGCCACGATGATTGTTGATATCACAGCTGCTGCATATGTGATAACTGCC
CGGAACCGTCCAGAAACCGACACGCCATCTGTTCAGGTAGTCTTACTGTTCAGTAGCAAC
CTTCGTCTATGACTGGCTTATCGTTATTGTCTACCGCTCACTCGCTTTGCTTTATCTAGC
TAACACAGCCAAAAAGAAAAAGAAAGAAAAGTCCACACCAAAAGAAAAACCACCAGTGGA
CGTGGAAAAGCAATGTGGTGTCCCGCTTCCCAACGGAGATCTCTGTGCACGGTCCCTTAC
GTGCAAGTCGCACAGTATGGGCGCCAAGCGAGCTGTCCAGGGCCGTTCACAGCCCTACGA
TGTGCTTTTAGCCTCGTACCAGAAGAAGAACCAGGTCAAGCTGGCTACTTTAAGCGCGCA
AAACGCCCTGGACGAGGAGAACGAGGCCTTCAAGGATGAGGTTGTGGACGACAATGAGGA
GTTTGCTCAGGTCATGGCCGGCGTCCAGAGAAGCTATCCTGTGCCCGTGGAACAGAAAGT
GGTCATGCCAACGCGGCTGAAGAACGACTTTTTCCGCATGCGAGAAATGCTCATTGGCAC
GCTCACTAATGTCGCCAGTGTTCCTCCTCCGTCCACTGGGGCTTCCAGCAGTGCCAGTCA
GATTATGAGTGCTACTGGAGCTGTTCTTGGTCGAACGGTTGTGTATGAACCGGGTACAGG
AAACAGTTTTGTGCGACCTAGTCGGGCAGTCAGGAGGAGATAAGGAGGTGATGCGAGGTT
CTGGGTTCGTCGTACCCATCATCACGTGATCAACGTGTGTTTTCGTCACCTGACATGTCA
TGTGATGATATCTCGAGCGGTGTGCACCACTGCTGTGGGTCCATGTACAACCCATGGTCT
GGTACCATGCTATCACGGCTCTGACCATGCGATACTCAGATCATGCGATTGAAAAAGCTC
TCGTCACGTGATTGCCTCCCAGCCGGAAATAGCTGGGTCACGTGTTGCGTCTCGGGCTCT
CGAGTGGCTCTGTTACATGACTGACTATGATGTTTCTTAGTCGGTTCATCCTACGGGCAA
CCAGGCTGTGACTAGTCTGGACCATCTGTCGTTACATGGAGTTCCGAGGATGGTTATTTA
TTTATGGTATAGAATCTAATATCGTGAAGGTGGACGAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05643g_CDS-001

Protein length: 249 aa.
Product: Conserved hypothetical protein

>YALI0C05643g_CDS-001 MVDKEKATRKRKAASDSKPAARKEKKEKDGDDVKARGKASKAGKAGKATKATKATKETKK
KKKEKSTPKEKPPVDVEKQCGVPLPNGDLCARSLTCKSHSMGAKRAVQGRSQPYDVLLAS
YQKKNQVKLATLSAQNALDEENEAFKDEVVDDNEEFAQVMAGVQRSYPVPVEQKVVMPTR
LKNDFFRMREMLIGTLTNVASVPPPSTGASSSASQIMSATGAVLGRTVVYEPGTGNSFVR
PSRAVRRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG