YALI0C05599g

Overview

Description similar to uniprot|Q03862 Saccharomyces cerevisiae YDR101c
Locus type CDS
Locus tag YALI0C05599g

Location

Species Yarrowia lipolytica Positions 714272..715891
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1620 (nuc.)
Previous locus YALI0C05577g Next locus YALI0C05621g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05599g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05599gYALI0C05599g_mRNA-001YALI0C05599g_CDS-001

Nucleotide sequence

 

>YALI0C05599g
ATGTCTCTGGCCCGATCTACCGCGCTTCTGGACGAAAAAAACACACTGACGAGCTCCGTC
ACCGACAAGTACCGTCTGGCCGGCAAAATCACCCAGACGTGTCTGCAGCACATTATCCAG
ACCGTTCTGACCCAATATGAGACGTACACGGTGGGAGAAATGTGCCGTATGGGAGACGAG
TTCCTCGAGCGAGCCACCACCGCCGTCTACAAGTCTGTGGCCGAGAAGGGCATTGCTCAA
CCCGTTCGAATCGAAAAGCAGGAGTTTGTGGGAGGAGTGAGTCCCGAGAACGGCGACAAG
TTCCAGGGAGGCATGTTGGCGCCCGGCGATCTGGTCAAAATCTCTCTGGGAGTCTACATT
GACGGATATACTGCCCAGGTGACACAAACAGAGGTTGTGCGACACGTGCCCAATACCTCT
GCTGGCGAGACCGAGCAGCCTCTGACCGGATCTCCTGCCGATGCGGTCTGTGCCTCCTAC
CTGGCGTCCGAGGCGGTCATTGCCTACCTGGCCCAGGTGACCGATCCCAACCCCGGCAAG
GCTGTTGGAGTTGTCACCGGTACCAAGATCCGAGAGCTCGTCGAGAAGATTGCTGCTGCC
TACCACGTCAAGATTGTGCCTGGATCTTCTGTGCGACGTATCCGGCGTTTCCTCGCTGGT
CAGCACGACATTGTGCTGGAGCGAGACTACAAGGGCGTTCTCTGGGAGGTTGAGGGCGAG
GAGGAGCGAGCTCTTCACGCCGTCAAGCTGGCCGAGTCCGAGGCTAAACAGGAGTCCACC
GAGGGCGCCGTCTGTCTGTACGAACAGCACATTGAGGAGGAGGAGAACTTCACCGTGGAG
GCTGGAGAGGCCTACCAGGTCGACATTCAGATGGCTGCAGCTCCCCAGAAGGGCGCTATC
CGTCTGTACGACTTCCAGGGCTACGACGAGTCTGGAACTGTGATCAACCAGTACGGACGA
GACTTCTCTGTCACCTATGGACTCAAGATCCAGGCCAGCAGAAAGCTGCTCAGTCAGCTG
GAGGCTACCACCTCCGTCTACCCCTTCAAGCTGTCCCACGTCGAGTCCAACGTTGCCAAG
GCCCGTCTGGGTTTGGGCGAGATTCTGGCCCATCAGATTCTGGTGCCTATTCCCGTCAAG
GTGGCCAAGTTTGTGCCTCTGGCTGCTCTCTACGAGTTTTCAAAGAACTCCAAGGCCCGG
GCCCGAGACGAGGCTTCCAAGGCTGTTCCCGTTGCTCGAAACTCGTCTTCTGTGCTGCTC
ACCAATGACGCCTGTCTGCGACTCACTGGAGGCCAGGCCTTCCCTCCTCCTTATGTGCAC
TCTGCCTTTGAGCTGCCCGAGGACGTGACCAACCTACTCAAGCTGGTGGGCCACAAGCAC
GGAGCCAAGGTCAAGGATGTTCTTCCCGGCGACGTCGACATGGCTCCTGCAAAGGAGGCC
AAGATGGAGGAGTAATCGAGTAACCGATAGTAACCGACCGAGGAGACAAGGAGAAGGAGA
AAGAAGCCATGGAATTGGCCTATGTTGATGCGATGAAGCAAGCAAGCAATAGCTCACAAC
GAGCAACACCTAGGATATTTTGGATGGACGTTAGCATTAATAGATTGTTATGATATATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05599g_CDS-001

Protein length: 485 aa.
Product: Nuclear export factor for the ribosomal pre-60S subunit, putative

>YALI0C05599g_CDS-001 MSLARSTALLDEKNTLTSSVTDKYRLAGKITQTCLQHIIQTVLTQYETYTVGEMCRMGDE
FLERATTAVYKSVAEKGIAQPVRIEKQEFVGGVSPENGDKFQGGMLAPGDLVKISLGVYI
DGYTAQVTQTEVVRHVPNTSAGETEQPLTGSPADAVCASYLASEAVIAYLAQVTDPNPGK
AVGVVTGTKIRELVEKIAAAYHVKIVPGSSVRRIRRFLAGQHDIVLERDYKGVLWEVEGE
EERALHAVKLAESEAKQESTEGAVCLYEQHIEEEENFTVEAGEAYQVDIQMAAAPQKGAI
RLYDFQGYDESGTVINQYGRDFSVTYGLKIQASRKLLSQLEATTSVYPFKLSHVESNVAK
ARLGLGEILAHQILVPIPVKVAKFVPLAALYEFSKNSKARARDEASKAVPVARNSSSVLL
TNDACLRLTGGQAFPPPYVHSAFELPEDVTNLLKLVGHKHGAKVKDVLPGDVDMAPAKEA
KMEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG