YALI0C04906g

Overview

Description some similarities with uniprot|Q9HEJ2 Neurospora crassa NCU01381.1 related to disease resistance protein aig2
Locus type CDS
Locus tag YALI0C04906g

Location

Species Yarrowia lipolytica Positions 639296..640582
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1287 (nuc.)
Previous locus YALI0C04884g Next locus YALI0C04928g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04906g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04906gYALI0C04906g_mRNA-001YALI0C04906g_CDS-001

Nucleotide sequence

 

>YALI0C04906g
ATGTCCCCCCCAAATTCCAACCTTATCGTTATCGCACCCCAAAATCCACCGACTCAAAAC
AGTCCGTATTCGCTACTCAGAAGAAAAAGAATGTCCACTGCGTTTTTGTGAGTATTCAAA
AAATGGAGTGAATTTGCCGACACTCACGCGAACACCCCCAACGCCCGGAAGACACGTGAT
CTCATCGGCCCCAAACCCGAGTCAGCAGAGCCATCTCATCAGTCATCTCAATTGAGTCAT
CTGGATCACGACGATGACAGTGGAGATGCGAATTGAGTGACAGGAATCGTACGTGGGTTA
AGCCAAGCTAAGATAACGAGTCACATGACCTATAGCGACTCGTAGATCATGTGTTTGGGT
GTCGAAGTCATCCCAGGACACGTGACTTTGAAAGGCTTCTTTTTTGGTCATCTCTGGTAC
ATACTTGTAAGGATATCAGGGATCTGCTATGATTGAAGCTTGGTTAGAGGTTACTATTCT
ATTACACACACGTGATCTACGCTTCCACTAGTCACGTGACATGAGAATGTCCACACGAGC
ATCCCTGCCCCATCTTACCAATTCTCGTTACTAATCCAGCTATGGAACTCTTACTCGTCC
AGAGGTTCTCGGAAGAGTGATTGCAAACTCGTTTGAGGTTCCTGCTCACGTGAAAGTCTC
TCCAGCGACTCTACATGATCACGTGCGATATCACGTGAAGAACCGTGACTACCCTGGTGT
GATTGCCAAGTCTGGCGCTTCTGTTCAAGGCACTGTGGCCTTCAATCTTTCGGATTCAGA
TGTGGCCAAACTCGATGTTTTTGAGGGCGAAGATTACAAGCGTGTTGTTGTCGATGTTGA
TGTCGATGGAACGAAGGTTCCCGCCCACTTGTATCTTTGGATCGGAGGTGAAGATCGGTT
GGATGACAAGGAGTGGGATGTGAATGTGTTTGTCAAGGAGAAGATGGACAGTTGGCTCTA
TGAGGAGCTCGGGGTCCATGTCAAGACGAGGGAATAAGATACTCGTGCTTTTCACACCAC
AGACGGCCCATCTCGATAGACAGATGTGCACAGCACCTGTATATAATGTATCACAACTGA
GAGGGTTGGGATTGATTTTAAGATAATCAGTTGTGTGCAGCTTTTTATTGATCTCGGAGT
AGTACTTTGTACAATTATGAGAGCTCTAAAATCTATATCCATCCTATCATGTCGTGCTGT
TTTGTTTCATTAATTGTGTACCATAGTTACCATATTACTTTGGGTTTAGTTTAAAATAAT
TAGTAGGCAAAATTTGGCCGACACACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04906g_CDS-001

Protein length: 175 aa.
Product: Conserved hypothetical protein

>YALI0C04906g_CDS-001 MSPPNSNLIVIAPQNPPTQNSPYSLLRRKRMSTAFFYGTLTRPEVLGRVIANSFEVPAHV
KVSPATLHDHVRYHVKNRDYPGVIAKSGASVQGTVAFNLSDSDVAKLDVFEGEDYKRVVV
DVDVDGTKVPAHLYLWIGGEDRLDDKEWDVNVFVKEKMDSWLYEELGVHVKTRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG