YALI0C04048g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C04048g

Location

Species Yarrowia lipolytica Positions 533988..535283
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1296 (nuc.)
Previous locus YALI0C04037g Next locus YALI0C04070g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04048g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04048gYALI0C04048g_mRNA-001YALI0C04048g_CDS-001

Nucleotide sequence

 

>YALI0C04048g
ATGAGCATCTTGCCCAACGAACTTTTGCTGCTGGCTCTGGCCCAGCTGCCGCTCGACAGC
ATCTGTGTCGCTGGCTCTGTGTGCTCTCACTGGCGCAAGTTGGTTGTGGACAATGACCAG
CACCTCTTTGCTAGCGAAATGTTGCTGCTATTTCCTCTCATGAACCCCATCAGACCACAT
GAAACCAACGATTCGTATCGTCTGCGGTTTCTCAGGGCAAGTCTGGGTCGCATCAAGGGC
CTGCCTAACCAGATCATTCACACGAGGCTATTCTACGAGCTGCAATTGCTGGATCAAGAA
CCCCCCACAGTGGACATTCAGGCCATCAAGATCGACACGACGGATAACCAACACATCACC
ATCCACAATAACGAACTGATCCCCGCCAACATGACTCCCTTGTTTGCTGAAGATGTCATC
TGCAGACACTGGGCTACAGACCAGAGCAGTGTGTCCTACATCAGAGACAAGATGCTGGTT
CGCAATGGTATAGAAACCGATCTATCCTCTGGAGAAGCCACCAACAAACTAAGTCACTAC
GATCTGCGAAAATGCTACATTGACACTATGTGCATCTTTTCTGTGGGAGACCGAACATAT
GTGGTGAGACTCAAAAGCTCCACCGCCAAGTGCTTGTCTGCACAAATGAGCGGAGATACC
CTATATTGCATAATATCCGATCATCAGTGGACAGTAGTTAGGGTGACTTCTAGCGGCGAG
CAGACAGAGGTGGTTATAGGAGACCAGGAGCTGACACCCTTGCTTCAGGTGCTGCATGGA
CATGTGTTTGTAGAGCAGCCATCTGTCTCGTACACCTCAACAGTCTACTATGTGAATATG
GACTCGCGCATCTCTTACAAGCTGTACCGGACTGATGGAATGGGCTCTGGGCTTCCATGT
GCCGTGTTGGATGGGTTCATCTACGTGTACTATGGAGTTGACCGACGGCGGCGGTTTAAT
CGACAGATGATCAAGCTGTTTTGTGATTTTGGCAGCAAGCAAAGAGAGTCTGGAAAGCAG
CTCGGTTATCAGGTGCCAGTCTACGTGGCGTGTATTCAGTATACGGACTCGGTGGATTTA
GCAGGAGGCACTCACACTAAGATTCTGAGTGATGCTACGGGCGCCTATTGCTTGTCTCAT
GACTTTGTCAAGACTAGTGGGCACTTGTGGAGGCCACGCGACCATCAGATTTTACAATTT
GAGCAGGACGAAGAACTATTTCAGGTCTGTGTGGAGCAGGGACGGGGACGGGTGCATGTG
TATAGGTATGCAGATAAATTTCATTGTGTGTAGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04048g_CDS-001

Protein length: 431 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C04048g_CDS-001 MSILPNELLLLALAQLPLDSICVAGSVCSHWRKLVVDNDQHLFASEMLLLFPLMNPIRPH
ETNDSYRLRFLRASLGRIKGLPNQIIHTRLFYELQLLDQEPPTVDIQAIKIDTTDNQHIT
IHNNELIPANMTPLFAEDVICRHWATDQSSVSYIRDKMLVRNGIETDLSSGEATNKLSHY
DLRKCYIDTMCIFSVGDRTYVVRLKSSTAKCLSAQMSGDTLYCIISDHQWTVVRVTSSGE
QTEVVIGDQELTPLLQVLHGHVFVEQPSVSYTSTVYYVNMDSRISYKLYRTDGMGSGLPC
AVLDGFIYVYYGVDRRRRFNRQMIKLFCDFGSKQRESGKQLGYQVPVYVACIQYTDSVDL
AGGTHTKILSDATGAYCLSHDFVKTSGHLWRPRDHQILQFEQDEELFQVCVEQGRGRVHV
YRYADKFHCV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG