YALI0C03674g

Overview

Description similar to uniprot|P13188 Saccharomyces cerevisiae YOR168W GLN4 Glutamine tRNA synthetase
Locus type CDS
Locus tag YALI0C03674g

Location

Species Yarrowia lipolytica Positions 488828..491350
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2523 (nuc.)
Previous locus YALI0C03663r Next locus YALI0C03696g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03674g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03674gYALI0C03674g_mRNA-001YALI0C03674g_CDS-001

Nucleotide sequence

 

>YALI0C03674g
ATGTCCGACGTTGCCGAGCTCAGCACCAAGCTGGAACATCTCGGTTTTGCCGAGCCCAAG
ATCAAGGAGGTGTTGAAAAACAAAAAGGTCGCCGCCTCCTTCAACGACATTCTCAACGTA
GTGAACGTGGGCAAGGACGAGAAGCGAGCTGCTCTACTCCACAACCTCGCCTCGTCCTCC
AAGGACGCCAAGGATGAAGCCGTGATCAAGAAGCGAAATGAGGTCGCCTCTGCCATTGCC
GACGGCCGAATCAAGACCAACGTGCAGCTGGACGCCGCCTGGAAGTGGGCCCAGGACCTA
CACAGCTCCGAGAGCCTCGATCAGGCTGCTGGCGTGGGCATTGAGGTCACCCGGGACGAC
GTTTATCGTGAGATTGCCGCCTACATTGCCGCAAACAAGGCTCAGCTCGAGGAGGAGCGA
TACAAGGCCCTGCCTGGTGTCATGGTGGCTGCCAAGAAGATCCCTGCTCTCAAGTGGGCC
AACCCTGCCGACTTTAAGCCCGTGATCGACGAGCAGCTCAAGGAGCTTCTGGGACCCAAG
GATGAGCGAGATCTCGTCAAGAAGAAGGCGCCCAAGGCCAAGCCTGCTGCCAAGGATGCT
GCCAAGAAGGAGGAGCCTGAGAAGGTGTCTGCCACCGCCATGTTCACCACCGGTTTCCTG
GGCAACCTGCACAAGACTGGAGAGAACCCTCAGGCCAACATGGAGCGAATGGTTGAGCAT
CTCAAGGCCACCAAGGGCCAGGTTTTCACCCGGTTCCCTCCCGAACCTAACGGATACCTG
CACATTGGCCACTCCAAGGCCATCACCGTTAACTTTGGCTATGCCCAGTTCAACAAGGGT
AAGTGCTACCTGCGATTTGACGACACGAACCCTGAGGCCGAGGAGGAGCGATTCTTCACT
TCCATTCGAGAGACCATTGAGTGGCTGGGCTTCGAGCCCTACAAGGTCACCTACTCGTCG
GACTACTTCCAGGAGCTGTACGACCTAGCTGAGAAGCTGATCGAGTGTGGAGGTGCGTTT
GTGTGTCACCAGACCGCCGAGGAGATGAAGGCTTCCCGAGGAGTGTCTGAGGGATCTCGA
GGAGGCGAGCGAGTGCCTTCTCCCTGGAGAAACAGAACCGTGGAGGAGAACCTGGTGGAG
TTCCGAAAGATGCGAGACGGCCACTACAAGCCCGGAGAGGCAGTTTTGCGAATGAAGCAA
GATCTCAACAACCCCAACCCCCAAATGTGGGATCTGGTTGCCTACCGAGTACTCAACGCT
CCCCATCACCGAACTGCCGACAAGTGGAAGATTTACCCTACCTACGACTTCACCCACTGT
CTGGTTGATTCGCTGGAGAATATTTCGCATTCGCTTTGTACCACCGAGTTCTACCTCTCC
CGTGAGTCATACGAGTGGCTGTGTGACGCTGTGGACGTCTACCGACCAGCCCAGCGAGAG
TATGGCCGACTTAACATCACTGGAACCGTTCTTTCCAAGCGAAAGATTGCCAAGCTCGTT
TCTGAGGGTCATGTTCGAGGCTGGGATGATCCCCGTCTCTTCACTCTGGTCGCTATTCGA
CGGCGAGGTATTCCTCCTGGAGCCATTCTCAACTTTGTCTCCACTCTCGGTGTCACCACT
GCCGAGTCCAACATTCAGCATTCTCGATTTGAGAACAATGTGCGGAAGTACCTTGAGGAC
ACTACTCCTCGTCTCATGATGGTGCTGGACCCCGTCAAGGTGACCATTGAGAACCTGCCT
GAGGACCACTTTGAAGAGTTTGACATGCCCTTTGGCAAGAATGACGAGCGGTCGCGAAAG
GTGCCCTTCACCCGAGAGCTGTACATTGACCGAAGCGACTTTGAGGAGTCTGCTGGCAAG
GAGTTCTTCCGACTCACTGCTACTCAGCCCGTGGGTCTGCTCAAGGTGCCCCACAACATT
TCTCTCAAGGAGGTCAAGAAGGATGCTGCTGGAAACATCACCGAGCTGATTTGCCATCTC
GACAACGACATTCCCTTCAAGAAGCCCAAGACATACATCCAGTGGGTCCCCGAGTGTGCT
GCCAAGAAGTCTCCCGTCAAGATTTCCGAGACCCGAATCTTCAAGCAGCTCTTCAAGTCC
GAGAACCCTCAGGGCCACCCCGATGGATACCTTGCAGATCTTGCTGAGGAGTCCGAGGTC
ATCCACAAGCATGCTCTTGTCGAGCCCGGCTTCTACGACGTCAAGGAGAACTCTCCTTGG
GTCACTGGTGAGCATACTGGCAAGGAGAAGAAGGGATCCCCCGAGAGTGTGCGGTTCCAG
GCTCTTCGAGTGGGATACTTTTGCATGGATAAGGATTCTACTGAGAAGGATATTGTTCTG
AACCAGATTGTTTCTCTGAAGGAGGATAACCAGAAGAAGTAATGCCGAGCGCAACCAGTC
GTAATGGTCACCATAAGCTTAGCAAGTCGTATGGTTCAAGTGCCTGTCGTCTAAAGCAAG
TCGGCCAGCTCCATCATTTATATATAGTTATGAGAAGTAATTTGATCATAATGTTATACG
TTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03674g_CDS-001

Protein length: 794 aa.
Product: Glutamine tRNA synthetase, putative

>YALI0C03674g_CDS-001 MSDVAELSTKLEHLGFAEPKIKEVLKNKKVAASFNDILNVVNVGKDEKRAALLHNLASSS
KDAKDEAVIKKRNEVASAIADGRIKTNVQLDAAWKWAQDLHSSESLDQAAGVGIEVTRDD
VYREIAAYIAANKAQLEEERYKALPGVMVAAKKIPALKWANPADFKPVIDEQLKELLGPK
DERDLVKKKAPKAKPAAKDAAKKEEPEKVSATAMFTTGFLGNLHKTGENPQANMERMVEH
LKATKGQVFTRFPPEPNGYLHIGHSKAITVNFGYAQFNKGKCYLRFDDTNPEAEEERFFT
SIRETIEWLGFEPYKVTYSSDYFQELYDLAEKLIECGGAFVCHQTAEEMKASRGVSEGSR
GGERVPSPWRNRTVEENLVEFRKMRDGHYKPGEAVLRMKQDLNNPNPQMWDLVAYRVLNA
PHHRTADKWKIYPTYDFTHCLVDSLENISHSLCTTEFYLSRESYEWLCDAVDVYRPAQRE
YGRLNITGTVLSKRKIAKLVSEGHVRGWDDPRLFTLVAIRRRGIPPGAILNFVSTLGVTT
AESNIQHSRFENNVRKYLEDTTPRLMMVLDPVKVTIENLPEDHFEEFDMPFGKNDERSRK
VPFTRELYIDRSDFEESAGKEFFRLTATQPVGLLKVPHNISLKEVKKDAAGNITELICHL
DNDIPFKKPKTYIQWVPECAAKKSPVKISETRIFKQLFKSENPQGHPDGYLADLAEESEV
IHKHALVEPGFYDVKENSPWVTGEHTGKEKKGSPESVRFQALRVGYFCMDKDSTEKDIVL
NQIVSLKEDNQKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG