YALI0C03652g

Overview

Description some similarities with uniprot|O13612 Schizosaccharomyces pombe Pi021 protein (Hypothetical 46.4 kDa protein)
Locus type CDS
Locus tag YALI0C03652g

Location

Species Yarrowia lipolytica Positions 484155..485916
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1762 (nuc.)
Previous locus YALI0C03630g Next locus YALI0C03663r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03652g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03652gYALI0C03652g_mRNA-001YALI0C03652g_CDS-001

Nucleotide sequence

 

>YALI0C03652g
ATGATCATTGCAAAGTTCTCTCGAAAAATCAACCCGCTACACCGATCCAAACGCCACGAT
CGAAACCCACCGTCCGATGGCCGTCTGCCAGGTATATCTCTGGAGGACGTGTCTCAGGTG
GCACCTGCCCCTCCACCAAAAGACCACCGGTATTCGCGCAAGTCAATGGACGAGGACAGC
AACGAACGACGGCGCCTGCGGCATTTGAGTCCGTTCAGATCGTCGGAAAAACGAGCGTCT
GGAGAGTATCTTCGCCAGGCTGAGAAACCCAAGACAAGAGGAGCAGGAGAGAGACGACCC
GGAAGCCAAACCGCAACACCCAGCCCGCCGCCGGTCCCCCACACCAACCCGAACCCCAAC
AACAGAGCTTCCCTCGACATGAACCGTCCAGACCTGCCCGATCGAGGTCCTCCCAAACCC
TCACGCCCTGCCACCGACGACTCGGCCGTGTCTAATGCGAGTTACTCCACCGTAAGTACC
TCCTTTGGCGCAGGACACAGCCAGAGCCCCTCGTACCCAAACCCCGGTAGCCCCAATCGA
GGGAGCCCTAACATGGGACATCGCCGAGGAAGCCCTAAGAGCAGCCCTAAGATGGGAAGC
CCTAACATGGTCCATCCTAACCTGGTGCACCCCAATCCAGGCTACCCTAATGGTGGCCGT
CCCATTCAAATCCCTGGCCAACATCAGCAGTACCCTAGCCCTGGCCAAATCCCTAGCCCC
GGTTCTGCTGGTGCCAAAACCACCGTCAAGTCGCCTCTGATGCGGCCCGATTCGCCCGAC
CAGCCGGTGCCCGATATGACCGACTTCAACCGGTCTTTCCATGTGCAGAATCCCGGCAAA
GTCACATGTGGATTCGAAGACATCTTTCTTCCCGTGGACGTGGAGAAGCAGGAGCACCAC
CGACTTGAACATCTGCAGTTCCGACACGAGGACTCACTCAAATTGCATCACACGCTGCAG
AAACAGCTCTATAACAAGCCTGGAGACGTGGTTCTGGAGTTCTATGATGTGACGGTCTAC
AAGGAGGACATTGACAACTTACAGCCTGGATACTGGCTCAACGACAACAACATTTCGTTT
GTCTACGAGTACCTGGAGCGTCTGGAGATTATGCGGGCCGGCTTCCAGTCCCAGATCTTC
TTGTTACGTCCGTCTATGGCATTTCTGCTGGGCCAGGGAGACCCCAAAGAGGTGGCCGAA
TTTCTGCCCGATTTCAAGCATGCATCCTTCATATTCTTGCCCATCAACGACAACAACAAT
GTGGAGATTGTCTCTGGTAACCATTGGTCGCTATTGGTGGTTTCTGTGGAGGACGGAAAG
GCCATTTACTACGACACTGTGGGCGAATGCAACATTGCAGCCGCGCGGAACGTTGCTGAT
AAACTGGGTGTTGTTCTCGGCCAGAAGCTCAACTTTCTCGTTGCTCCTACTCCTCAGCAG
AGCAATGGCAGTGACTGTGGAGTCTATGTGTGCGAGATTACCTCTTTGCTGCTGAGGCGA
CTGCTGTACACCGAGGGGTTCATTGATTTGGGTATTTCCAATCTCACCTTTGTTGCCGAT
GCAGGACGAACATTCATCCTCACTGCCATCTTGCAGCTGATCTCGATGTTTGGTCCCAAG
ATTCGGGAGCGAATTGAGTGATTGGAGATTGATTATTTTGGTTACATGCATGTTAGTAAG
CGATTTGGATGTTTCTTGATCGACCATTATGGAGTGTTATTTGCATCTAGTTAGAAGGAA
TATATTTATGATAGATTTCGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03652g_CDS-001

Protein length: 547 aa.
Product: Conserved hypothetical protein

>YALI0C03652g_CDS-001 MIIAKFSRKINPLHRSKRHDRNPPSDGRLPGISLEDVSQVAPAPPPKDHRYSRKSMDEDS
NERRRLRHLSPFRSSEKRASGEYLRQAEKPKTRGAGERRPGSQTATPSPPPVPHTNPNPN
NRASLDMNRPDLPDRGPPKPSRPATDDSAVSNASYSTVSTSFGAGHSQSPSYPNPGSPNR
GSPNMGHRRGSPKSSPKMGSPNMVHPNLVHPNPGYPNGGRPIQIPGQHQQYPSPGQIPSP
GSAGAKTTVKSPLMRPDSPDQPVPDMTDFNRSFHVQNPGKVTCGFEDIFLPVDVEKQEHH
RLEHLQFRHEDSLKLHHTLQKQLYNKPGDVVLEFYDVTVYKEDIDNLQPGYWLNDNNISF
VYEYLERLEIMRAGFQSQIFLLRPSMAFLLGQGDPKEVAEFLPDFKHASFIFLPINDNNN
VEIVSGNHWSLLVVSVEDGKAIYYDTVGECNIAAARNVADKLGVVLGQKLNFLVAPTPQQ
SNGSDCGVYVCEITSLLLRRLLYTEGFIDLGISNLTFVADAGRTFILTAILQLISMFGPK
IRERIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG