YALI0C03608g

Overview

Description similar to uniprot|P25568 Saccharomyces cerevisiae YCL038c similarity to bacterial membrane transporter singleton
Locus type CDS
Locus tag YALI0C03608g

Location

Species Yarrowia lipolytica Positions 478116..480410
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2295 (nuc.)
Previous locus YALI0C03586g Next locus YALI0C03630g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03608g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03608gYALI0C03608g_mRNA-001YALI0C03608g_CDS-001

Nucleotide sequence

 

>YALI0C03608g
ATGGACATTGTTGCAACGACACAAAAGGAGCTGTATGGATGGTACGCGTATGCATGGGCC
GCCGAGCCGTTCATGGTTGTGGCTGTAGCAACTTACATCCCCCAATTGTTGCAATCATAC
GCTCGTCAGAATGCGGTTTTAGCAGACGATCACTCTCAGCCCTGCGATTCGCCTCCAGTG
CCATTTCCAGGCGACCCCGGAGTTCCTACCGACCCTGGTATCCCCCCAAACAACAGTCTG
TCCTCATCTGTGCCCTGGTTTCTGCGCGCAAATGAGATTCAGCTGTTGGAGTCCCCCGAC
ACCGTGCATACCATGAAAGACCATAAGGCGAAACCCACACAGCCCACGTGCGTCATCAAA
TTTTTTGGCATCTACATTGACACTGCATCTTTTCCTCTCTACACATTCTCGCTTTCAGTG
CTGCTGCAGGTCGTCGTGGTCATCTCCATGTCTGGAGCAGCCGACCGCGGCCGTTTCCGA
AAACAATTGCTCTTGTTTTTCGGCATTGCCGGAGCTCTAACCACCGGCCTGTTTGTTTTT
ATCACCCCCAAGCGGTACTACCTTGGTTCGTTCCTCGCTATCGTCTCTAATGCTGCTTTT
GGTGCCGCTACAGTGTGCGGAAACGCATATTTGCCAGTCCTGGCAGCAGGTATGAAGGAC
GGAACCACGTCAGAGGAGCCCAGCGAGCCCAGCACTCCTTCCGATACGTCGAAACCCGCC
TCCAGAAGCGAGAACACACCGCTGCTATCCGCCTCAGGTGTTGACTACGAGACTGGAGAA
TCATCCAACACAGCCGAAATCGTCAAAATCGACCACAGAGCAAACGTGTCGGCCAGAATC
TCGGGAACAGGTGTAGCCCTGGGCTACCTTGCCGGATTCATTGTCCAAATCATCTCCATA
TATCTGGTCATCACTACAGGTTCTACCACCTGGTCTCTGCGTCTGGCTCTGCTGATTGTT
GGTGTATGGTGGCTCATTTTCCAGATTCCTGTGCTAATGTGGTTAAAACCACGTCCTGGT
CCTCCTCTTCCTATCAAGACAGACCCCCAGAACCACCCCTGGACTGCTACTCTGGATCGT
GTCACTAACGGAGGATGGTCGTATGTTACCTATGGATGGAAGACCCTCCTGGTGACCTTC
AAAGAGGCTCGTCAGATGAAGGATGTGGCTCTTTTCTTGGTGGGTTGGTTCCTAGTGTCC
GATGGAATCACTACCATCAACTCCACAGCCGTTCTGTTTGCCCAGGGTGAGCTGCGGATG
TCTCCTGCTAATCTGGCGGTCATGGGCATGCTCGTTGTGATCAGTGGCATTTCTGGAGCC
AAACTGACACCTCTGATTGGAGGAACAAGGGCGTCTCCTATCAAATCCATCGTTGTAGTG
GTTTCTCTGGCTGCTGCAGTTCCCGCTTACGGTATTCTAGGTTTCTTCTTCACCAACATT
GGTCTGAAAAACCCGTGGGAGCTTTACGTGCTTGCTGTTTGGTATGGCTTTGCTCTCGGA
GGTCTCAACACTGTCTGTCGATCGACGTTCAGTATGCTGATTCCACGCGGAAAGGAGGCT
GTCTTCTTTTCGCTCTTTTCCGTCACCGACAAGGGCTCCTCTGTGCTCGGGCCCCTACTT
GTTGGTCTGATTGTTGACAAGACTCATAACCTGCGCCACGCCTTCTACCTTCTGTTGGTA
CTGCTGATCACTCCCATTGGACTGTTCCTGATGATTGATATGGAGCGGGGTAGAAAGGAG
GCCGAGTACTTGGAGACGGTGGAGGAGTAGATAGAAGATGTGGCATACTTACGATATTGA
AATATATTACGGATTTAGCCAGCCTACGAGTAATGGAGGCGTATTACTGTATGGTGGCGA
CAGTCAATGTTACTGCCCTTGATAGTTGCACTAGTGGACTTACACAGGGTGGCAGTGGGT
GCGGTGATACTTTCACAAACAACTTTCTCCCCACAGATATTCTTGCTTTGGTCTGTGCTC
ATTTGCAACTTGATGATATTGTCGTCTTTGGACAAGTTAACAGACCCATACGACTCAGCT
GATGGGAGTAATCCTTGAGCAACAGGGTACTACAGCATGTTCTTTTTCGATACAGGTACA
AGGAGACATGCAGGTCATTCTTCTCAGGTGTCTGCTCTTTTCTTCACCTGTAGAGTATAT
CCAACGATTTAAGTCAAGTATCGAGAGAGGACTACTGTGGAGTGTACTGTACGGAAGGCA
GTTGATAAGTACCAGTTGTATTACAGGTGGCTCTTTACAGTTGTCATTAGTTTAATCGAG
ATGCTTGTATCGTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03608g_CDS-001

Protein length: 590 aa.
Product: Vacuolar integral membrane protein required for efflux of amino acids, putative

>YALI0C03608g_CDS-001 MDIVATTQKELYGWYAYAWAAEPFMVVAVATYIPQLLQSYARQNAVLADDHSQPCDSPPV
PFPGDPGVPTDPGIPPNNSLSSSVPWFLRANEIQLLESPDTVHTMKDHKAKPTQPTCVIK
FFGIYIDTASFPLYTFSLSVLLQVVVVISMSGAADRGRFRKQLLLFFGIAGALTTGLFVF
ITPKRYYLGSFLAIVSNAAFGAATVCGNAYLPVLAAGMKDGTTSEEPSEPSTPSDTSKPA
SRSENTPLLSASGVDYETGESSNTAEIVKIDHRANVSARISGTGVALGYLAGFIVQIISI
YLVITTGSTTWSLRLALLIVGVWWLIFQIPVLMWLKPRPGPPLPIKTDPQNHPWTATLDR
VTNGGWSYVTYGWKTLLVTFKEARQMKDVALFLVGWFLVSDGITTINSTAVLFAQGELRM
SPANLAVMGMLVVISGISGAKLTPLIGGTRASPIKSIVVVVSLAAAVPAYGILGFFFTNI
GLKNPWELYVLAVWYGFALGGLNTVCRSTFSMLIPRGKEAVFFSLFSVTDKGSSVLGPLL
VGLIVDKTHNLRHAFYLLLVLLITPIGLFLMIDMERGRKEAEYLETVEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG