YALI0C03333g

Overview

Description weakly similar to uniprot|Q03761 Saccharomyces cerevisiae YDR145W TAF12 Subunit (61/68 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification
Locus type CDS
Locus tag YALI0C03333g

Location

Species Yarrowia lipolytica Positions 437458..439459
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2002 (nuc.)
Previous locus YALI0C03289r Next locus YALI0C03355g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03333g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03333gYALI0C03333g_mRNA-001YALI0C03333g_CDS-001

Nucleotide sequence

 

>YALI0C03333g
ATGAATCAAGGGCAGGGCCAACAGAATCCGAACGCCGGCAACGCCCAGGGTCAAGGTGCC
CAGGGCCAGGGCCAGGGCCAGGGCAACGCCCAGAATCGGCCTCGGTTGAACCCCCAGCAG
CAACTCCGAGCTCTCTACCAAAACTACCATCAGGCTCTTGAGCTGTCCCGGCAGAGTGGT
GGCCAGCAGCATTTTGTACACGCGCAGCGGCTGCGCGAGTTGATTACTCAGGTTGAAGGT
CGAATGAGACAACAGATGGCTCGTCAGGGTCAAGGACAACAGGGACAAGGTGGTCAGCAG
CAAGGACAACAGGGACAGCAGCAAGGTCAACAGGGCCAGGTTCCTCCGCAGGGCCAGGTC
CCTCCGCAAGGAATGGGTATGGGTATGAACCAGGGCCAGAACCAGGGCCAGAACCAAGCT
CAGGGCCAAGGTAGAATGACCCCCAATCCCCAGGCTACAGGCACGCCCAACCCTGGAAAC
ACACCCAACCCCGCTAATGCCACTCCTAACCCCTCCAACCCCACAAATAACCCACGGATG
AACCAGCAGCTGCTTCAGGCACAGACATTCTTGCTGCGTCGACAGCCTCCTAACTTCAAC
GAAATGACGTACGAGCAGCAGCAGACGTTCCGGGTCAAGAACCTCGAGTCGTCACGCCGA
ACACAGCACGAATGGCAACAATCCATGGAGCAGATGCAGCAGGTCATTGGCGACCCCAAC
ACTACCGATGATCGTCGTCAGCAGCTCCAGCAGCAACTGGACCAAATCCGGCTGAAGAAG
GAGGGTCTGAGAGCCATTGAAATTGTGCTCGGACAACAGCACGCCGCTGCCGCACGAGCC
CATGGTGACGTGAGCGTGACTGGAGCTCAGGGCCAGGGTCAACAGACTCCTAACCAAGCC
CAAGCACAGGTTCCCCAGAACCAGGGATTGCGACCCATGGGCCAGATGCAGGGCCAGAAC
CAGATGCAAGGCCAGGGTATGAACCAGGGCCAGATGAACCAGGGTCAAGGCATGGCCCAG
GGTCAAGGTATGGGCCAGGGACAAGCTCAAGGACAACGACCCATGATGCAGATGCGACAA
GGCCAACAAGCTCAAGGTCAACAGGGTGGCCAACAAGCACAGGGCCCAGGTATGCCCCAG
GGCCAGGGTATCCAAGGCCAAGGTATGCCTCAGGGTCAGGGTATGCCTCAGGGCCAAATG
CGTCCTGGCCAACCCCAGGGACAGCCCCAGGGCCAACCTCAGGGCCAGATGCGACCTGGA
CAGCCCCAGGGCCAGGGTATGCCTCAGGGACAAGGTCAGGGTCAGATGCGACCTGGTCAA
CCCCAACCCCAGGCTCCTCAGGCTGCACAAGCGCAGGCTGCACAGGGACAACAGGGCCAG
GGCCAGGGTCCCTCCTCGCGTCCTAACCCTGCTCAGCAGCAGCAGCCCTCGGCCATGGTT
TCTCCCACCAGAGCCGCCGTCAACCCCTTCCCTATTCCCCAGCAGCTTCAGGCTCGTCAG
GGACAGGTTCCTCCCATGGCTGCTCGGCCTCGAGCCACTCTAACAGGTGGAAACGGAGCG
CCTCTGCCTTCTCTCAACCACCCTCCCCACACTCGAGCTCCCCCCGTCGATATGATGGGC
GACCGAGTTCTGAGCAAACGAAAGCTGTCGGAGCTAGTTCGATCGGTGGCTGGAGAAGAT
GCCGAAGCTACAGTTGATGGAGACGTCGAGGAGCTGCTGCTGGATCTCGCCGATGAGTTT
GTGTCTTCTGTTACGGCCTTTTCGTGCAGACTGGCCAAGCATCGAAAGAGCGATACCCTG
GAGTCCAAGGATCTGCAGCTGCACCTGGAGCGAAACTGGAACATTCGAATCCCCGGTTAC
AGCGGTGACGAGGTTCGAAGTGTGCGACGACTGGCTCCCACTCAGGGCCATGTTCAGAAA
CTCGCGGGTATTACCATGAGTAAGGCTGTGGCCAAGTAAGGATAAAAAGGTTGTGTATAA
AGAATATATGTATTATAGAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03333g_CDS-001

Protein length: 653 aa.
Product: Conserved hypothetical protein

>YALI0C03333g_CDS-001 MNQGQGQQNPNAGNAQGQGAQGQGQGQGNAQNRPRLNPQQQLRALYQNYHQALELSRQSG
GQQHFVHAQRLRELITQVEGRMRQQMARQGQGQQGQGGQQQGQQGQQQGQQGQVPPQGQV
PPQGMGMGMNQGQNQGQNQAQGQGRMTPNPQATGTPNPGNTPNPANATPNPSNPTNNPRM
NQQLLQAQTFLLRRQPPNFNEMTYEQQQTFRVKNLESSRRTQHEWQQSMEQMQQVIGDPN
TTDDRRQQLQQQLDQIRLKKEGLRAIEIVLGQQHAAAARAHGDVSVTGAQGQGQQTPNQA
QAQVPQNQGLRPMGQMQGQNQMQGQGMNQGQMNQGQGMAQGQGMGQGQAQGQRPMMQMRQ
GQQAQGQQGGQQAQGPGMPQGQGIQGQGMPQGQGMPQGQMRPGQPQGQPQGQPQGQMRPG
QPQGQGMPQGQGQGQMRPGQPQPQAPQAAQAQAAQGQQGQGQGPSSRPNPAQQQQPSAMV
SPTRAAVNPFPIPQQLQARQGQVPPMAARPRATLTGGNGAPLPSLNHPPHTRAPPVDMMG
DRVLSKRKLSELVRSVAGEDAEATVDGDVEELLLDLADEFVSSVTAFSCRLAKHRKSDTL
ESKDLQLHLERNWNIRIPGYSGDEVRSVRRLAPTQGHVQKLAGITMSKAVAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG