YALI0C03245g

Overview

Description similar to uniprot|Q04934 Saccharomyces cerevisiae YDR229W IVY1 Phospholipid-binding protein that interacts with both Ypt7p and Vps33p
Locus type CDS
Locus tag YALI0C03245g

Location

Species Yarrowia lipolytica Positions 432975..435247
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2273 (nuc.)
Previous locus YALI0C03223g Next locus YALI0C03267g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03245g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03245gYALI0C03245g_mRNA-001YALI0C03245g_CDS-001

Nucleotide sequence

 

>YALI0C03245g
ATGGGTGAGTATTCGAAGCGAAAGGGAAGGGGATATGGGCAAGTCGAGTCACGTGGAAGT
CACATAGGCATACGGAGAACGGGTCATGTGACAGGACACGTGTGCCTTGCTAGTTTTTAC
ACGACTTCGACAACCATGACATGTCAATACAGATATGCGACGAGCGATGAGCACACCATC
GACGATATGGAAAAATTCGCACTGGTGTCGTCTCGGGTGACACAAATGGGGGGACTGTGA
CGTGAACGATGTCGTGACACACACCGAAGGAGTGATATGACTTCGGCAGCTGTTATGACT
GAGATATGATCAAAGAGTTACTACACTACGCCGATGTTACATTGACATAGAGGCGACTAT
GGTACCACAGAGAACATGCCCGAAAAATCCAGAAGAACCAGGAATTTTTGCAGAGGACTT
TCAGGTATGTCCATGACACATACCAAGTGGTTCAAATCCTTGTTATCAATGTCGATATCA
GATAACTTGCTGGTGCAATGCGGCTCAGCTACAGCCCGCACCCACGTCAATGGTTATCGT
CGCAGTGATACAGGCTGTCTAGTTTTTCGGTGGTGTTTCTGTAGATGCCAGACTTGTATC
ATGTCCATCACCATGGTCTTCTCAGCACTCCATCACCAGTCAGACAATCTCGCCATGTTT
CACACAATGTCGCCGCGTTACTGCGTCACTTTGACAGTATCAACGATCTCGTTACTTCCT
GTGCTCGTCTGTACATTTTGAGAAATCCTAGTTACCACCTGCAATTGCTTGTTCCATAAA
TGCCGCTCTCGCTGGTGCCAGTCACAGCTTGCACCTAACCGCTCCCAGCTGTTATGATAT
CCCCATTGATTGTCCCACTCAAGTAATCGCGATCCTTTATCTTGAGTGTGCTACTCATAG
TAGTTGATGCTAACCCAGAAAACTCCCACCTCTCTGAATTCTACTCCTTCACCAGAAAAC
GCCGTCCTAGTGATGCATCTACCACGTCGCGGCTATCGCACTTTTCGGCAGCAACGGCAC
AAACAGGGGACTCGCTCCCTTCGATGATGCCGCCGTCATCACTGCCTCTGGACATGGACA
AAAGCCAGATTATCGGCACCAAACACATCAAGGAGTCGCGAGAGGCGTACAATCACGTGA
TTGAGGCGGCGCAAAAGTACAGAGACGCTCTCGATCTCGTGTCACGTGCCTCTGCTGAGT
TTGGAGGTGCCCTGGAACAACTTTCTCACTGTAAAGGTGTTCCCGACGGCCTCCAGGCTG
CTGCAGGGCTTTATCTGCTGGTTTCCAATCATCAGCAGATTCTAGGCGACACAATTGACA
AAAACTTTGTTGTCCCGGTAACAGCCCTCGGTAAGGGTCTTCAGCAGCGATCGGCTGAGA
TCCACTCCGAGTACCGGTCTAGTCACGTGAGCAAGTCTGCGGAGCTACGCAAAAAGGAGC
AGCAACAGCGAGGGTTCGCGAAGCAAAAGCGGGCACGTGATCTAGCTGCTTACAGACAGT
CGTTGATGGACGTGGCAGCCGAGATTGACGGGTTGGACGCTCTCAAGGGCAAGTACTATC
AAGATATGTGGGAGGCACATTCTTTGGCAGGAGACACTCTTCTTGGAAGTGTTTCTTCGG
CTGTACGAGCGGAGGTTGAGATCCATGAAGGCGTAGCTCGAAAGGGATGGTCTGGTGGGG
GCCTTGATGAATTGATCGAGGAATCTGGCGATCCCTTTGGCGAGATTGAAAAAGACCATC
TGCAGCCCATTGTCGGGTCCATGATGGGAATGGTTGACGATGGTCACGGTCGCGAAGAGG
ACGGTACCGAAGGGGATGTGACTGAGGAGGCTATCGATAGAGTCACAACCGAAACTGGAG
AGTGTCGTATAAGTGACACTGAAGGAGGAGAAGGCAGTGATAGTGAAAGTGTTCACACTG
AGACTGAATCGAGGGTGGAGGGAGTCGAGGAGGTGTCGACAGAGGGTGCGACAGAGGGTG
CGACGGAGGAGGGTAATTCGGTGGACTCTGCAGAGTCTGACTCGCTGCCCAAGCTGTCCA
CCTCTATGGATGCAAAATGGTCCTCCGAAGACTAGACACACTGTATACTAACATTGAATG
ACGGAAGACAAGGATCATATGTATTGTAATGCTGTGGGGGGTGTATTGTAGTGAAAGCAT
GAAGTACTGTAAAGTAGGACTAATGCTGACACTTATCACAGAAAGGACGTCCAAGGGGTT
TAAACGACGTCTCCGATGTCTCCAAATATAACTACATCGATAGATAGTAACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03245g_CDS-001

Protein length: 387 aa.
Product: Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, putative

>YALI0C03245g_CDS-001 MENSHLSEFYSFTRKRRPSDASTTSRLSHFSAATAQTGDSLPSMMPPSSLPLDMDKSQII
GTKHIKESREAYNHVIEAAQKYRDALDLVSRASAEFGGALEQLSHCKGVPDGLQAAAGLY
LLVSNHQQILGDTIDKNFVVPVTALGKGLQQRSAEIHSEYRSSHVSKSAELRKKEQQQRG
FAKQKRARDLAAYRQSLMDVAAEIDGLDALKGKYYQDMWEAHSLAGDTLLGSVSSAVRAE
VEIHEGVARKGWSGGGLDELIEESGDPFGEIEKDHLQPIVGSMMGMVDDGHGREEDGTEG
DVTEEAIDRVTTETGECRISDTEGGEGSDSESVHTETESRVEGVEEVSTEGATEGATEEG
NSVDSAESDSLPKLSTSMDAKWSSED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG