YALI0C03047g

Overview

Description weakly similar to uniprot|P40505 Saccharomyces cerevisiae YIL084C SDS3 Component of the Rpd3p/Sin3p deacetylase complex, involved in transcriptional silencing and required for sporulation
Locus type CDS
Locus tag YALI0C03047g

Location

Species Yarrowia lipolytica Positions 412291..413497
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1207 (nuc.)
Previous locus YALI0C03025g Next locus YALI0C03069g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03047g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03047gYALI0C03047g_mRNA-001YALI0C03047g_CDS-001

Nucleotide sequence

 

>YALI0C03047g
ATGGCCAAGAAAACCACCCGAAGAAGCCGACAAATGACGGATTACCAGTCGCTCACCACG
CGCCGATTTCACTCCAACCGTGGTCAGCATCTCATCAAATACATCGAAAGCATCCAGGGC
AAAATCGCCGCAGTGGAGGAGGAAACAGACGTGGATCTGTTGGAAGAGCTGGAAGATCTT
GCAGAAACCAGAGACATCAACCTAGTGAGCCTCAAGTTTAACCAGGAGTACCGGATCTCT
CGGGTTCAGGCCGATGAATCTCGTGACCTTGAGTCTCTGCGGGTCAACCATGAAATCAAA
ACCAAGAGTTTGCAGTCTCGTTTTCTGAACCATCTAGAGATTCAAAACAAGAAGCTGTCG
TCAGAGATTCGAGAGTTGACAGACATTTCCAATGACCGGGCAAGCCTGGGCTTTCTCAAG
GGTTTCAGTCATGTGATGGTGAAGCAGGAGGATGGAGAGGGAGGGTCTCGGGATGGAAGC
ACCCCCCACTCCGGAGAAGAGTCCGGAGAAGAGTCCGGAAGCACCGGGCGACGTTCCGGA
CGGGTCAGAGGAGCGGGTTTGCTGGCTCGAGTGTCCCGGGAGACTCGAGAGACCCCAAAT
TCGCATCGAGACTCAGACTCAGACAGGTTCGACATGCTCGGCATTGTCTGGACGGATTCT
GACAAAGCAGCTCTTTCGGGGTCCGAACGAACCGGACGACGAGGTAGAGGCGAGGACAGT
GATCATGTCGACGGCCACGTTGGGCGAGGCCACAAGGGCAAGGAGAGTGCTGTTGCTGGT
CTGACCCAAGTTAAGCCTGCCGAAGCTATGGCTGACTTGCAAGAGATGCGGCGACACTAA
GAGAGTGAGGAAAAAAGAGAAACGAGATCTCTGTCAAAAGATGGTTTAAAATGACACAGC
AATGAACAGTGTCTCCGACCCTCTCCTATGCATGGACAAGAGTGTGACTGGATTGGAAGA
TGATGAGGGTGTAACCGATGATGAGGGGAAAATAGTGATAAATTATTGAGTAACAAGGAG
TTTTGGTTGTTGAGCGTGTTATTTGGGTACAGTTGATGATCTGAAATTCCTAGATATGGA
AGGTATGGTAGGTTCACAGTCATATCCCCATCATGAAGCAATTCTGTCATACTGACCCTC
AGACTATACATGATAGCAAGTAACTACTTGTTGTTTTTTTCGTATTTACAAAATTTGTAA
TTGTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03047g_CDS-001

Protein length: 280 aa.
Product: Conserved hypothetical protein

>YALI0C03047g_CDS-001 MAKKTTRRSRQMTDYQSLTTRRFHSNRGQHLIKYIESIQGKIAAVEEETDVDLLEELEDL
AETRDINLVSLKFNQEYRISRVQADESRDLESLRVNHEIKTKSLQSRFLNHLEIQNKKLS
SEIRELTDISNDRASLGFLKGFSHVMVKQEDGEGGSRDGSTPHSGEESGEESGSTGRRSG
RVRGAGLLARVSRETRETPNSHRDSDSDRFDMLGIVWTDSDKAALSGSERTGRRGRGEDS
DHVDGHVGRGHKGKESAVAGLTQVKPAEAMADLQEMRRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG