YALI0C03003g - SPS193

Overview

Description uniprot|Q6CD80 Yarrowia lipolytica YALI0C03003g SPS193 Peroxisomal 2,4-dienoyl-CoA reductase, putative
Locus type CDS
Gene name SPS193
Locus tag YALI0C03003g

Location

Species Yarrowia lipolytica Positions 407328..408261
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 934 (nuc.)
Previous locus YALI0C02981g Next locus YALI0C03025g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03003g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03003gYALI0C03003g_mRNA-001YALI0C03003g_CDS-001

Nucleotide sequence

 

>YALI0C03003g
ATGCCCAACACACTGTCTCCCGATTGGCTCAAGAAGTCCGTTTTCAAGCCCGACATCTTC
AAGGGCAAGGTTGTCTTCGTGACCGGAGGTGCAGGCACCATTTGCCGAGTGCAGACTGAG
GCCATGATTCTGCTGGGTGCTGACGCCGCCATCATCGGACGACGACCCGAGGTTACACAG
AAGGCCGCCGACGAGATGGCCCAGCTGCGACCCGGCGCCAAGGTCATTGGTGTTGGAAAC
ACCGACGTCCGAGAGGTCAAGTCTCTGGTTGCGGCTGCTGAGCGAACCGTCAAGGAGCTC
GGCCGAATCGACTTTGTCATCTGTGGTGCTGCCGGCAACTTCCTGTCCGACTTCAACCAC
CTGTCTTCCAACGCCTTCAAGTCCGTCATCTCCATCGATCTGCTTGGATCCTACAACACC
GTCAAGGCCTGTTTCCCCGAGCTGCGAAAGAACAAGGGCTCCATCCTCTTTGTCTCCGCC
ACTCTCCACTACTACGGTATCCCCTTCCAGACCCACGTCTCTGCCGCCAAGGCCGGTATC
GACGCTCTGTCAAACGCCCTGGCCGTCGAGCTCGGACCCCTGGGCATCCGATCCAACTGC
ATTGCTCCCGGTGCCATTGCCGGAACTGAGGGTATCGACCGACTTCTCCCCGCAGACATG
CGAGAGAAGGCTCTGTCTCTGATCCCCGCCCAGCGATGGGGCCAGACCGAGGACATTGCC
AACGGTACCGTCTACGTCTTCTCCGAGGCCGCCTCTTACGTCTCCGGAACCACCATCGTT
GTTGATGGTGCCGGATGGCACACCTCCAACGGTGCTGCCAACAACGCCGTTTACCCCCAG
ATGCTCATTGCCCAGGGTAACGACACCCCCAAGCTCTAAGCGCAGTTGTATAAAACACGA
CATAGTATATTGTATTGATGAAGTTATCAGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03003g_CDS-001

Protein length: 293 aa.
Product: Peroxisomal 2,4-dienoyl-CoA reductase, putative
Gene: SPS193

>YALI0C03003g_CDS-001 MPNTLSPDWLKKSVFKPDIFKGKVVFVTGGAGTICRVQTEAMILLGADAAIIGRRPEVTQ
KAADEMAQLRPGAKVIGVGNTDVREVKSLVAAAERTVKELGRIDFVICGAAGNFLSDFNH
LSSNAFKSVISIDLLGSYNTVKACFPELRKNKGSILFVSATLHYYGIPFQTHVSAAKAGI
DALSNALAVELGPLGIRSNCIAPGAIAGTEGIDRLLPADMREKALSLIPAQRWGQTEDIA
NGTVYVFSEAASYVSGTTIVVDGAGWHTSNGAANNAVYPQMLIAQGNDTPKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG