YALI0C02453g

Overview

Description weakly similar to uniprot|Q08754 Saccharomyces cerevisiae YOR299W (ohnolog of YMR237W) BUD7 involved in bud-site selection
Locus type CDS
Locus tag YALI0C02453g

Location

Species Yarrowia lipolytica Positions 344610..347651
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 3042 (nuc.)
Previous locus YALI0C02431g Next locus YALI0C02475g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02453g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02453gYALI0C02453g_mRNA-001YALI0C02453g_CDS-001

Nucleotide sequence

 

>YALI0C02453g
ATGGCTACGTTGGATGCGATTCCTGAGTAAGTACGAGAAGAGGCGAAAGCGGCGGGGGGA
CCAATTGCGGAGATAAATGCGGTCGCGTGATCGCGACAGAGACGGCGGCTGGTCGACGTG
GCAGTGGTTACGTGGTAACAAGACTGGACCAGACACCAACACGGCATTTATTGGGGCGAT
CAGGGTGGTGACACAGATGGAATCAGACAGATATGGAATCAGACGACAGACACCCAGAGA
AACAGAAAGGGATAGCAGCACTGCGACACGCAACTTTCTGAGACATACCTTCACCTACCA
ATGATGAAGGTGCTTTGTAAGGGAGTTTATGGGTCAGAAGATGACACGGGACGTGTGGCG
AGGGTCTGTGATGTGTTAATTGCGACCTACGTCATACTCACGGACGTGTTTTGATATGTC
ATGTCACCTTCGATGGTGACGTTACGACGGAATGTTCTTTGCACCATTACGTGTCAGGGG
GTATGCGGAGTGTCTTGCGAGCGAGTAATATGTCTTCAACCGGACATTCCACTGATGACA
CATCAATCACACTTGCCATTCTGGTAGTTTCTGATTGTCTTTTCTGATTGTCTTTTCTGA
TTGTCTTTTCTGATTGTCTTTTCTGATTGTCTTTCTGATTGTCTTTTCTGATTGCCTTCT
GATTTTGTTATCTCCGATAGTGCATGCCGTTGTATGTGTCGTCAAGGTGCTGTGTCCAGT
ATGACTTTGTAACCCAAAGCTTGGAATTGCATTTAGACTACATTTCCGACAGTGTTGTTA
TCCAGCGCAGAGACGTGTCATCTACAGTGTCTGGGTCACGTGTTGTCTGTGCGATTTCTT
CGTTTTATCATCTGCTGGTACACCTCACTACAACTTTCACGACAACACCAGTTTAGTTAA
AAACTAACACAGATTCCTAGAAACCACGGTTGGAGAGTCGCTCACAGCTCGAACCAACGC
GCTGGCAACGTTCAAGGAGCTGGGTCCCCCCGACCTGGTGCACTTGACCAAGGTGGACCA
CCGAGGCGAGTCCGGGACCTACCACTACGTTATTGGTGTCGACGTGTCGTCTGCGGCGTC
TGTGGCCGTCCACCTCAACCAACTGACCTACTCTCTTGGAGAGGAGCAGCTGTGGTTTGG
CAAGCCCCAGACATGGAAGATTACCCAAGGTCTGCTGTGTTCGTTCAATGCCTTCACCAA
GTGTGACGTACGAATCATTGTAAAGATCCCCGGCGGCGTGGAGTCGTACTTTGTGGACCC
TCGAGGCGAGAGACACTCCATGACCGACCAGGTGTGGCTGGAAACATACATGAGTGCCAT
GATCCGGTCGTTACTGTTTGCCGACGACGACACTTTCTTGACGCATGGCTGTCTCAAGCT
GCGACCTCTGCCGCTGAAGAAGAAGAATGTGGTCAACGGCGACTCTGACGAGGGCAACTC
GTCCAAGAAGGACGCCACTTCACTGCCCAGCTTGATCCCCGATTCCGACAATGACGTCTA
TCTTGGCGGCGACTTCTTCCTTGACACCTTTGAGCGTCTTTTCGGCATTGGGCCTCTTTC
GGGCGCCTGTTCAGAGATCCAGGTGCCTACTCTCGTCAGCAATTATCTTGTTGACGCGTT
CATGGCCTTCATGCGAATCACCCGGCTGTACGACAGAGGTCTGGAGATTGTGCGACGTTT
GCAGACCGAGTACCCCGAGGTGGTGTCTCTGATTGCACGAATCCAGCTGCTGATGGACGA
GGAGGTGGAAGCCGTTAAGACCATGGTAAAGGGCTTGGAGGAGAATGGCCGGGACGCAGA
TCTGCTCTCCCTGCAGGCCGAGTTCCTGCTGTCCAAGAACCGAGAGGATATGGCTCTTGG
ATGCGCCACACGAGCCGTCAACTCTGCTCCCTCAGAGTCCAAGCTGTGGACAGAGCTGGT
GCAGGTGTATATTCGCCAGAAGGATTGGGAAAACGCCCTTCTAACGCTCAACTCTTGTCC
CATGTTCACATACCACGAGCACGACCAGCATCGAATGCCCGCCCCCGCCAAGAGTCACTA
CCCCCTGCCTCTGGATGGCATTCTCAAGGACGTTTACGAGGCGTCGCAGGTCGACCAGAC
CGAGGAGCATGCGCAGATCGACCCCAAGCTCCTGAAGCTACCCGCCCCCAACCTGCGGGC
CACCTTTGCCAAGGTCTACGAACATCTTACGGCCATTGTTCACGAGATTGGCTGGGACCA
GCTGCTGGAGGTGCGATCACGTGTGTTTGTGATGGATGAGGAGTACAAACGTGGCGGCCG
TAGCGACAAGTCGAACAACCAGTCTGGGTCTGCTTCTACTGCGGCCATCCCACCTGCTTC
CGCCACTGCCTCGGTTGCTGGATCTACCACTGCCGTCGGATCTGCTGGTCTCACGGCGCC
TGAAACCTCACACGCCAACGTCTCGTCGACAAGCGTGTCTGCACCGCAGTTCCGACACAA
GCGACTGTGCGAGCGGTGGCTGGACAATCTGTTTATGGTGCTGTACGAGGATCTCAAGGT
GTACACTGTGTGGCGGGCCGAGATGCTGTACTCGCAGAGCGAAAACCGGCCGTTTGAGAA
ACATGCGCTGGAGTGGGAGATTTTGGGTCTGGTTGCATTCCGTCTGCGGCATTATAACGA
GGCTGTTGACGCATTTATGCACTCGCTTTCGGCTCGGTTCTCTGCACGTGTGTGCTGGAA
GCTCTTGCAGTACTACTCGGACGTGTATCCCGAGCAGGAGAAGCAGCTTGCTCCTCAGGT
GAGCAAGACTGTTGCCCGGGTGGCCGAGGAGCGGGAGATTGATGTGCTTGTGCGGCTCGT
GTCCTTCAACCACCGGTGCTACTCGGTTTTCTCCGTCAAGCTTATTGAGGCGTACCGAAA
GCTGGTGGATCGGGACGGCCTGGTCAAGATCCAGAACCGGATCCGAGCCATTTTCTATGA
TGACAAGGGCGTGTTGGAGCTGGTCAACGAGGTGTTCCAGGGAATTCACTAGGTCCAATG
CGAGGTATATAGACGAATATGATGATTGTATAATAGCTGAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02453g_CDS-001

Protein length: 702 aa.
Product: Conserved hypothetical protein

>YALI0C02453g_CDS-001 MATLDAIPEFLETTVGESLTARTNALATFKELGPPDLVHLTKVDHRGESGTYHYVIGVDV
SSAASVAVHLNQLTYSLGEEQLWFGKPQTWKITQGLLCSFNAFTKCDVRIIVKIPGGVES
YFVDPRGERHSMTDQVWLETYMSAMIRSLLFADDDTFLTHGCLKLRPLPLKKKNVVNGDS
DEGNSSKKDATSLPSLIPDSDNDVYLGGDFFLDTFERLFGIGPLSGACSEIQVPTLVSNY
LVDAFMAFMRITRLYDRGLEIVRRLQTEYPEVVSLIARIQLLMDEEVEAVKTMVKGLEEN
GRDADLLSLQAEFLLSKNREDMALGCATRAVNSAPSESKLWTELVQVYIRQKDWENALLT
LNSCPMFTYHEHDQHRMPAPAKSHYPLPLDGILKDVYEASQVDQTEEHAQIDPKLLKLPA
PNLRATFAKVYEHLTAIVHEIGWDQLLEVRSRVFVMDEEYKRGGRSDKSNNQSGSASTAA
IPPASATASVAGSTTAVGSAGLTAPETSHANVSSTSVSAPQFRHKRLCERWLDNLFMVLY
EDLKVYTVWRAEMLYSQSENRPFEKHALEWEILGLVAFRLRHYNEAVDAFMHSLSARFSA
RVCWKLLQYYSDVYPEQEKQLAPQVSKTVARVAEEREIDVLVRLVSFNHRCYSVFSVKLI
EAYRKLVDRDGLVKIQNRIRAIFYDDKGVLELVNEVFQGIH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG