YALI0C02211g

Overview

Description similar to uniprot|Q04991 Saccharomyces cerevisiae YMR221C FMP42 Vacuole membrane protein that belongs to the SLC43A transporter (TC 2.A.1.44) family
Locus type CDS
Locus tag YALI0C02211g

Location

Species Yarrowia lipolytica Positions 289233..291015
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1783 (nuc.)
Previous locus YALI0C02189r Next locus YALI0C02233g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02211g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02211gYALI0C02211g_mRNA-001YALI0C02211g_CDS-001

Nucleotide sequence

 

>YALI0C02211g
ATGGCTTCTAGCACGCGGAAAATCGTCCAGGTGGCGTGCGCGGTCCTCTGGTGTCTGTTT
GCCGCGGGCCCCATCTTCGGCTTTGCGGCTCTCAAGCCGGTTCTGGTAGCGGAGGGCGTC
TACAGCCAGTACTGCTCCAACTCGCCGTCGGACGGCCCCTGCAAGGAGCAGGATCTGCGA
CTCAACTTCATGTTCAACGTGGGCGCGATTCTGACCAATGTAGACGCCATTGTCGTGGGA
TTCGTGCTCGACAAGTACGGGCCTCGAATCAGCGGCATAGTCGGATCTGTGGTCATTTTT
GTCGCCACCCTGGTGCTGTCTAACGCCGCGTTGCTGCCGGGGGACCCCTGGCTGGTCGGC
TACTCGCTGCTGGCCGTGGGAGGCCCGTTTGTGTTCATTTCGAGCTTCCACCTCAGCAAC
ACGTTTGTGCAGTACTCAGGCACCATTCTTGCGCTGCTGACGGGGGCGTTTGACGCCTCG
TCCGCGGTGTTCCTCGGCTTCAGAATATCCTACGAAAACTCGGGCATCTCGCTGTCCCAG
CTCTTCTCCATCTACACTATTGTGCCCATCTTCATTCTCCTGGCGGAGGTGTTTGTGATG
CCCCAGACTAGCTACAAGTCCGACGAGTCGTTTGCGTCGGTGGTCTCCACCTCCGCAGGC
CACATGGAGGCCGAGGAACAGGCACTGTTGGAAGACGCAGACCTCACCAACTACACCGGT
CGACGATCGTCCTTCATCTCCAACCGAGGCTCCTTCCTCAGCCGACGACGCCCCTCTCTG
GTCCACGAGGCCCCCACTCCCCAGAACCTGGCACAGTACGGCTCTCTCAAGGGCCTGACT
GCTAGACAGCAGCTGGCCACCAACTGGGCGTTCCTGATCATCGTCTTCACCACCCTGCAG
ATGCTCAGAATCAACTACTTTGTTGCCACCATCAACTCCCAGTACACATACCTTCTGGGC
CACGAGCAGGCACAGAAGATCAACGGCATCTTCGACTACTTGCTGCCTCTGGGCGGCGTG
CTTGCCATCCCCATGATTGGCTTTGTTCTCGACCATATGAGTCTGGTGGGCTCCTGGACC
ACCGTGGTCACTCTGTCGCTCACTCTGGGAGCCCTTAACCTCGTTGCCAAGCCCTGGGCC
GCCTACATCAACGTGTTCTTGTTTGTGCTCTACCGACCGCTCTACTACACGGCCGTGAGC
GACTACGCTGCTAAGATTTTCGGGTTCAAGACCTTTGGCACCGTTTACGGCGTGGTGATT
TGCATTTCCGGTTTGTTCAACATTCTGCAGTCGGTGCTCGACCGACTCACCAAGCAGACC
TTCCACCTCAACCCCAGCCCCGTCAACACCATTCTGCTGGGCGCCACAGCCGTCTCGGGT
CTTGCGCTGGTCGGATACATCAAGAGTCAAGGCCAGAACCTCAAGCGGCAGTTTCTGGAG
ATTGAGGCCGAAGCCTCTGAGCCCATGCCCATGCCTGGTACTCCTGCGGTTCCCGGTGTG
ACCACCACGCATGATCCTCTTCACGGCGAGACCGAGATCTCCTTCAACGATCCCAAGCAC
ACCAGCAAGCCCAAGAAGGACGATGGTGATAGCTGTGGCACAGGACATTGCAACAATTGC
GTTTGTGATGTTTAACCGTGTGAGAACAATAACAAAACAAAAGTCGATGGACAAGCGGAC
TTGATATATATGAATTGATTATCAGATGGAAGGGAGGGATGTGGGATAGACTTGCCAGAG
GCATCAGACCGATAATGGAGTAGGAATGTATATGTGTACTGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02211g_CDS-001

Protein length: 545 aa.
Product: Vacuole membrane protein that belongs to the SLC43A transporter (TC 2.A.1.44) family, putative

>YALI0C02211g_CDS-001 MASSTRKIVQVACAVLWCLFAAGPIFGFAALKPVLVAEGVYSQYCSNSPSDGPCKEQDLR
LNFMFNVGAILTNVDAIVVGFVLDKYGPRISGIVGSVVIFVATLVLSNAALLPGDPWLVG
YSLLAVGGPFVFISSFHLSNTFVQYSGTILALLTGAFDASSAVFLGFRISYENSGISLSQ
LFSIYTIVPIFILLAEVFVMPQTSYKSDESFASVVSTSAGHMEAEEQALLEDADLTNYTG
RRSSFISNRGSFLSRRRPSLVHEAPTPQNLAQYGSLKGLTARQQLATNWAFLIIVFTTLQ
MLRINYFVATINSQYTYLLGHEQAQKINGIFDYLLPLGGVLAIPMIGFVLDHMSLVGSWT
TVVTLSLTLGALNLVAKPWAAYINVFLFVLYRPLYYTAVSDYAAKIFGFKTFGTVYGVVI
CISGLFNILQSVLDRLTKQTFHLNPSPVNTILLGATAVSGLALVGYIKSQGQNLKRQFLE
IEAEASEPMPMPGTPAVPGVTTTHDPLHGETEISFNDPKHTSKPKKDDGDSCGTGHCNNC
VCDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG