YALI0C01738g

Overview

Description similar to uniprot|P35184 Saccharomyces cerevisiae YIR012W SQT1 Essential protein involved in a late step of 60S ribosomal subunit assembly or modification
Locus type CDS
Locus tag YALI0C01738g

Location

Species Yarrowia lipolytica Positions 240891..242446
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1556 (nuc.)
Previous locus YALI0C01716g Next locus YALI0C01760g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01738g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01738gYALI0C01738g_mRNA-001YALI0C01738g_CDS-001

Nucleotide sequence

 

>YALI0C01738g
ATGAGTGTAAACAACCATCTAGGAGACCAGATCGACGCGCAGGCATCGCACGACCAGGAT
AACCAGAACGACATCTACATTGACGAATCTGAAATCGCCGATGTTGTTCCCGATTCCAAC
GAGCCTGAGCCCGAAGAGGACGATGACGATATGGAGGGTCTCGACGAGGGCATGGAGGAC
GACGGAGAGCAGGGCGAGGGCGAGGAGCGAATCGAGGTTGATATGCGAAACAATGCCGTG
GCCTGGTTCGACAAACATGAGGACTCTGTGTTCCGAGTGATTGCACACCCCTCGGTGCCT
CTGGTTGTGTCTGGAGGTGGCGACAACTGTGGATACATGTGGACCAGCAATTCCAACGAA
CCAAAGCTGGTGACCAAACTGGACGGTCACAAGGAGAGTGTGACCGATGGAGGCTTCACT
GCCGACGGTACTTTTCTGGTGACTTCAGATATGGCTGGATGTGTCAAGTTGTTCCACGGC
ACTAACAAGTTCCAAAAATGGACCGAAATTGACTCGATCCAGGAGGTTGAGGAAGTCGTG
TGGACCAAGGTGCATCCCGAGCAGAACATTGTGGCCTTTGGAGCCACCGACGGCTCCGTT
TGGGTCTACTCCATTGAGGACACTGGCTTCGTGTCCATGACTGTGCTGAACGGTCACTCT
GGCTGCTGCACTGTTGGCACCTGGGTTCTGGCCGACGACAAGGACTCTCTGACTCTTGTT
ACCGGCTCAGACGACGGATCCATCGTCAACTGGAATGTCTACAACTCCGTGGCCAACTAC
ACTCTTTCTGCCACTCTGTTCAAGGGCCCCGACGTCTGGGTGTCCATGGCCGAGGACCCT
ACCAAGAAGACTTTGGCCGCTGGAGCTGCCGACGGCAAACTCGTATTGTTCAAGATTGAC
GGAGGTCAGCTCATTGAGACCATCAACACTTGCTCTACCAAGATGGAGGACGGAGAGCGG
TCTGTGGAGGCTCTGTCCTGGTGCAAGAGCATGAAACTGCTGGCCGCTGGAACCACTTCT
GGTCAGATTATGCTCTACGACACAAACACCTGGCGTCTGCGAAAGATCCTCGTCATGGGA
GACGCCGTCACCTGGCTGCAGTTTATCGAGGATACTCCCGTGCTGGTGGCTGGTGCTATG
GACGGAGTTATTCGACGATTCGACGCTCGAAACGGTGACGAGATGTGGGTTGGACGAGGA
CATAACATGGGTGTCTTGGATATGGCTGTTACTAGCCAGGGTAAGCTGGTTACTGCGGGT
GACGAGGGTGTTTGTTTGGTTTTTGACGAGACCAGCGAGAGTCTCCCTTAGACAAGAGCG
AGATGAGTGAACCGCGACTGCAAATAGCGACAGCTAACAGCGAACAGCGAACGAATTTCT
GCTGTAGGAGTCAATTGACCGCTACAAATTGATCAGTTGGCATGTGTTGATAACATCTGC
TACAGTCAACCGTGTACACCAATCAAAAACTCCAGCACTCGGAACTCGTCAAGAGCCGTG
CATTAATAGCTTGGAAAAGCTTTCCTATAGATGAATTAACTATGATACAACAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01738g_CDS-001

Protein length: 437 aa.
Product: Protein involved in 60S ribosomal subunit assembly or modification, putative

>YALI0C01738g_CDS-001 MSVNNHLGDQIDAQASHDQDNQNDIYIDESEIADVVPDSNEPEPEEDDDDMEGLDEGMED
DGEQGEGEERIEVDMRNNAVAWFDKHEDSVFRVIAHPSVPLVVSGGGDNCGYMWTSNSNE
PKLVTKLDGHKESVTDGGFTADGTFLVTSDMAGCVKLFHGTNKFQKWTEIDSIQEVEEVV
WTKVHPEQNIVAFGATDGSVWVYSIEDTGFVSMTVLNGHSGCCTVGTWVLADDKDSLTLV
TGSDDGSIVNWNVYNSVANYTLSATLFKGPDVWVSMAEDPTKKTLAAGAADGKLVLFKID
GGQLIETINTCSTKMEDGERSVEALSWCKSMKLLAAGTTSGQIMLYDTNTWRLRKILVMG
DAVTWLQFIEDTPVLVAGAMDGVIRRFDARNGDEMWVGRGHNMGVLDMAVTSQGKLVTAG
DEGVCLVFDETSESLP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG