YALI0C01045g

Overview

Description weakly similar to uniprot|Q08748 Saccharomyces cerevisiae YOR296w unknown function
Locus type CDS
Locus tag YALI0C01045g

Location

Species Yarrowia lipolytica Positions 142508..146294
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 3787 (nuc.)
Previous locus YALI0C01023g Next locus YALI0C01067g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01045g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01045gYALI0C01045g_mRNA-001YALI0C01045g_CDS-001

Nucleotide sequence

 

>YALI0C01045g
ATGTCAGCTATACGCCGCAAACCCGTGGGAGACCCGCTCACGACGACGCGACGACACTCG
CGGGTCAAGTCGGGAATCTCCAGGGTAACCGAAAAGTCACTGTTCGACCAGGTGCTCAAG
GTGTGTGTCTTGTCATACCGATGCGAACCGCGATTCCGAGGGGGAGGCAAACGGCAGTCG
CGTGACTTGGCGTCTCTGGGGGTGTCGGATCCCACTCCGTCGTTCGGCGACCAAAAGTTG
CCCAAGGAGGCCCCCAAGCTGCTGCAGCAGAAGCTTAACAAGCTGGCTCTTAACCAGGGT
TCTAGCGACATCACTGACCCGCTGGTTCGGCGGTGTTTCCTCGCATTTTACGCTCTACTT
TTGGATCCAGACTTTTCCCGTCGAATCAAAGAAAACAGACGGGCTGAAGACGTGGTCATG
TTCTTCATTTCCTCGTCCACGAAGGAGTTGGCCAAAAGCGGCTCACAGCCAGCAGAAACT
AAACGACTGGTCAATTACTTCACCGCCACCTTTGTCAAATTTCTGATTGCCACCCTGCGA
GAAGCAGGATTCGAATCGTCCTGTGCTTCTCTTATTCGACAACTACAGAGCTACGAATCA
AAGCTGGTTAATGATACGGGCAACCTGGGAGAGTCAAACGGAAGCGCATCTTACTCGGCG
GGACTGACACCAACGTTTGACGTGGCAGATATTCATCTGGCCAAATCGCTGGGTCCGTAC
TTTCTCATGAGTGACAGTCTTATTCAGAAAGGTGTCTCTGAAATCAAAGATACAGCCACT
GAGCAGGCAGCAGAGGCAGATCTTCGACTAGCACTGGACCAACTCAAACAAGACAGATTC
CCATATTACCAAAGACAGTATTTTGGTTCTGACGACGCGTATCAGGATTACAAGAATCGA
GCTATAGAAGCTGTTCAGACACAGCTGGCAGGGTATGGAGCCCAGTCGTCAACCCAGAGC
ACCACTTACTACTACATTCCCGAAGATCCGCGTGCCTACGGGCGATTACTGGTCAAAATC
TGTCTTTCCCACGACCTCAAGTCCAAAAGTGATACTCTACTGAGCAAAAACTCGATCGCC
ATTCTCACGGAATGCTTTAATCTGTGGCAAATTCCATCCAGTACACGAGCCGCGCTTGTT
ATGGACGTTTGTCAAGAACTGCTCAAGTTGAAGGAGCTTCCCATCTCCCTCATCGAGGAC
TCGGTGTCTTTCATTTCACACGTAGGCCGGGAGAACGGCAAACGAGAGTGGGACACGTCT
CTGTGGCCGGTCTGCGACAGAGAAGTGTACGTGTTGGGGCTCAAGGAGGTGCTTGTGTTC
GTCATTGACCTCATTTCAGGCTGCATTAAGTCAATCTACGAACAGAAACCACCCTCCATT
GGTCCCTATCTGCAGATTCTCGGCGAGTGTGTCTTTTGCTCGTCCGAATGGGACAGGGTC
GAGATGATAGTCGATATGCCCAAGGTATTCGACAATCTGAGTCTAGTGGTCAAGAGTGTG
GCCGAGCATAAATACGACGAGTTCATCGACGCCATTCCACGTGACCATACACTGGATCCT
CTGCATATCATCGAGTTGGCGGACCGAATCATCTCTTCCGCTGAGAGGCTGCAGAAACGA
TATAAACGGCCGCTTTTAGAGCACGTTCCCATTGCTCTGATTGCAGCCAAGACACATTTT
TCGCTGTTTTCTGTTGATTCGCAGTCCATGTTCACCCATCTGATGAGCCACATGACCGCA
CGACACGAGGAGCCCTCTTACGATGATATGACGCTGCTGTATAAGAAGCTGTGCGAGATC
AGAGAGCTCTATGTCCAAGTTTTACCTGGCAAGTTCCCGTTTGATCTCGAGGCTGCGTTT
GTCAAGTACATTAGACGGCATGTGGAACAGTCAGCGACTCTAGCGACTTCCTGGGTTGAT
CCTGCCATTGATGCGGATAAGTGGGAGCCTATGGACGAAGGAGAAGGCATCATGTACTCG
TCTTCGGTGGCAGACATGTTCACTTCGTTGGGAACAGCTCTGGCGATCATCTCAGAGCTC
CACTGGGACAATCCCGTGCATGTGGCCCAGTTCTACACCACATTGATGAATGGCGTGTCA
GTGGCTGTGTGCAAGTACGCCTCGAGAGTGTTCCAACTGTTCAGCGAGGAACTGGAACTC
GAGGACGACAAGAAGGTCAAGTACAAAAGCCGGCAGGAAAAGTGGATGGCCATGGCAAAA
AACGCCATGGCTGGTAGTGCTCCTCTCACTCCGTATCAGTTCAAAAAGACCACATGCATT
AAACTGAACGATATTGAGACGGCACAGGCAAAACTGGACGAGATTGAGGCGCAGTTGGAC
TCGGAGAAGCTTGCAAAGGTTCTGGAGGGAGTCAATACCAATGCTGGACCCGGTAAGATT
GTTACCAAGGACACAACCAACAAGAAGCGTGCTTATCTCTTCACTATTCGCATTGTCCAG
GCTGAGAATCTAAAGGCGTGCGATATGAACGGACTGTCGGATCCCTACGTGACTCTTGTC
GACCAGGCTACTCGAAAACAGATTGGAAAGACACGTACAATTTTTGAAGAGCTGAACCCC
GTGTGGGACGAGACGTTTGAGATTGCCACAGGCGGTCCTTCTTGGTTGACCGCCACAGTA
TGGGACGAAGATTCCTTAGGATCACATGATCTCTGCGGCCGAGCATTTTTACGTCTAGAT
CCTGCTGCCTTTGGAGACTTTATTGCCCAGGATTACTGGCTGGATCTGGACACTCAGGGA
AAGCTTTTGGTGAACATTACAATGGAAAGTGAACGGGACGATGTGCGGTTCTACTTTGGT
AAGGCTCTGAGAACGCTAGTGCGATGTGAAAACGATATGATCAAGGTCATGGTTGATAAA
CTGACGGCTTTCATTCAGTACTCATTGTCCAGAGAGACTATGAAGAGTCTCATCAGCCCC
GGGAGAGGCAAGCTCAAGGAGTTCAATATGGAGAGCGTCTCCAGTTGGCTGAGTAGCACG
AGTATTTCAAATGTACCTCTTACACCTACCATGATTGAAGACGCCATAACTCCGCTGTTT
GACTATCTCAACGAGTCTTTTGCGACGCTGGCAGTCGGTCTGACTGACGAAATCCGGCTC
AAGGTCATGTCTCGAACGTGGAGAGTCGTTTTGACGACTCTGACGTCTCTTCTCTTGCCT
CGTTTGTCCTACAAGCGTACCTCCAAGACCCAGCTGTCTGCCAAGGAGGTCGATATTGTC
TTCACATGGCTGTCTTCTCTTCGAGACTTTTTCCACCACGATGGAGCCGGTCCCAGTCTC
GAAGTGTTGCATTCTCAGCAGTACCAGGAGCTGATGCGGGTGCCTGTCTATTACGACTTG
TCCAATGAGGAGCTCAAGGACGAGTGTGAGAAACTGTCTTCTTCTACGTTTAAGGCCCTG
CAAGACAAGACTTACGTCGGTCTGCCCGAGCTCATCAAGCGAAAGAACACCGTCATGGCT
CACAGAAACCGAACGGTGATGCGCAAGCAGAAGGAGCGGATCCGAAACGCCAAGCGAGAG
GCGCCTCAGAACGAGGACATTATTCTGTGCATTCTGAGAATGAGGGGCGAGCTGGACTTT
GTGGCGAGACGAATAAAGCAGAAGGAGCGTCTTCAGCAGACGTTGGCGACTGAGAGTCTG
GTAGCCAAGGGCAGAAAGTAATATGGACGATTATAATGATTATGATGTTATGATTTAGTT
TGGATTAAATAGGGTAATTGGATTGGTCTTGTTTTAAGTAGAAACTCGACTGACTTTTGG
ATGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01045g_CDS-001

Protein length: 1227 aa.
Product: Conserved hypothetical protein

>YALI0C01045g_CDS-001 MSAIRRKPVGDPLTTTRRHSRVKSGISRVTEKSLFDQVLKVCVLSYRCEPRFRGGGKRQS
RDLASLGVSDPTPSFGDQKLPKEAPKLLQQKLNKLALNQGSSDITDPLVRRCFLAFYALL
LDPDFSRRIKENRRAEDVVMFFISSSTKELAKSGSQPAETKRLVNYFTATFVKFLIATLR
EAGFESSCASLIRQLQSYESKLVNDTGNLGESNGSASYSAGLTPTFDVADIHLAKSLGPY
FLMSDSLIQKGVSEIKDTATEQAAEADLRLALDQLKQDRFPYYQRQYFGSDDAYQDYKNR
AIEAVQTQLAGYGAQSSTQSTTYYYIPEDPRAYGRLLVKICLSHDLKSKSDTLLSKNSIA
ILTECFNLWQIPSSTRAALVMDVCQELLKLKELPISLIEDSVSFISHVGRENGKREWDTS
LWPVCDREVYVLGLKEVLVFVIDLISGCIKSIYEQKPPSIGPYLQILGECVFCSSEWDRV
EMIVDMPKVFDNLSLVVKSVAEHKYDEFIDAIPRDHTLDPLHIIELADRIISSAERLQKR
YKRPLLEHVPIALIAAKTHFSLFSVDSQSMFTHLMSHMTARHEEPSYDDMTLLYKKLCEI
RELYVQVLPGKFPFDLEAAFVKYIRRHVEQSATLATSWVDPAIDADKWEPMDEGEGIMYS
SSVADMFTSLGTALAIISELHWDNPVHVAQFYTTLMNGVSVAVCKYASRVFQLFSEELEL
EDDKKVKYKSRQEKWMAMAKNAMAGSAPLTPYQFKKTTCIKLNDIETAQAKLDEIEAQLD
SEKLAKVLEGVNTNAGPGKIVTKDTTNKKRAYLFTIRIVQAENLKACDMNGLSDPYVTLV
DQATRKQIGKTRTIFEELNPVWDETFEIATGGPSWLTATVWDEDSLGSHDLCGRAFLRLD
PAAFGDFIAQDYWLDLDTQGKLLVNITMESERDDVRFYFGKALRTLVRCENDMIKVMVDK
LTAFIQYSLSRETMKSLISPGRGKLKEFNMESVSSWLSSTSISNVPLTPTMIEDAITPLF
DYLNESFATLAVGLTDEIRLKVMSRTWRVVLTTLTSLLLPRLSYKRTSKTQLSAKEVDIV
FTWLSSLRDFFHHDGAGPSLEVLHSQQYQELMRVPVYYDLSNEELKDECEKLSSSTFKAL
QDKTYVGLPELIKRKNTVMAHRNRTVMRKQKERIRNAKREAPQNEDIILCILRMRGELDF
VARRIKQKERLQQTLATESLVAKGRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG