YALI0C00979g

Overview

Description similar to uniprot|C5DH17 Lachancea thermotolerans KLTH0E00638p
Locus type CDS
Locus tag YALI0C00979g

Location

Species Yarrowia lipolytica Positions 134831..136738
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1908 (nuc.)
Previous locus YALI0C00957g Next locus YALI0C01001g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C00979g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C00979gYALI0C00979g_mRNA-001YALI0C00979g_CDS-001

Nucleotide sequence

 

>YALI0C00979g
ATGGTCAACATCGTCCAACTCACCACAGGTCTTTTGGCAGCCTCTGGGCTAGCCAAGCGA
GCAGACAACTCGTCTCATCAAATCCAGGTCCCGGACATTGGCAACGAGGCTCTCCTAGAG
TGGGGATTCCAGGAGGCCCAGAAGATCTTCAACACCTCGGCTTCCAACTGCACAAAGTGC
CAACAGGGTATCAATCTCGGCAAATACATCACCCTCAAGGCCCCCACAGTCACCCCAAAC
CTCATGGTGAAGCTCTGCAACTTCTACAAGTGGCAGGACGACTGCGACTCCTACCAGGGA
GCCAGCATCACCAGAGGCAACCAGGGCAAACATCTGGCCCAGGTCTTTACTCTGATGGAC
GCCTTTGGACTCGATGGCCAAGCTCTATGCAACGGATTCGCTCCACTTACCTGCGATCGT
GTCCAGGTGCCGGTTCCGGACTTGTCTTCCTGGTGGCCAGAGAAGCCCAAAAACCCAAAG
AAAATCGAATCGTCCTACAACGAGACCTTCAACGTGCTGCACATCTCCGACTTCCATCTA
GATCTCAGATACACGCCCGGACAAGAGGCCTGGTGCGACGACTACATGTGCTGCACAGTC
GAGTCCCATAACGAGGCGGCTATAGCTGCTGGTCTCAATCGGACCGTCTTGCCGGCCCAA
AAACTCGGCTCGTACCATTGTGACTCGCCCGAGGCACTCGTTGAAGACTCCATGAAGTCT
GTGGGTGCCATGTCGCTCGCCCGAGACTTTGAATTTGGACTCTTCACTGGCGACATGGTG
TCGCACGATCTCGAAGACTGGCTCTCCTTCGCTCACTCCTACCAGTCGGAAGAAGAATGC
TACTACCTGATGAAAAAGTACATGGGCGACATTCCCGTCTATCCGACTTTTGGCAACCAC
GACTCGTATCCTTATGGGCAGGTGGCCCAGAACTCCTCTGGTTTTGCCGGCGACTTTTCC
TGGAACGCTGAACTGTCGGCCAAAATGTGGAAGGACTTTGGGTGGATCAATGAGACCACC
GAGGCCCAGGCCGAACATACCTACGGGTCTTTTGCAGTCACTACCAAACGTGGCCTGAGA
GTCATTTCGCTTGACTCGAATCTGTGGTACTCAGGAAACTACTACAACTTCTGGAACATC
ACCGACCCCGACCCATCTGGCCTGTTCCACTGGCTGGTGGACGAGCTTCTTTTGTGCGAG
AAACTCGGACAAAAGGCCTGGATCATGGCTCATATTCCCGCTCAGGACTTGGGGGCAACG
GGATGGAACTCGGAGGTGTTCAGACAAGTGATCAGACGCTTTTCTCCCCATGTTATTGCC
GCCACCTTCTTTGGACACACCCATGCCGACCAGTTCAACCTCTTCTACGAAAAAGACAAT
GTATGGACAGAGGAGAGTGCTCTAGCGGTTGGCTGGATCACCCAGTCGGTGACCCCCGTC
GACCTCTACAACCCAGCCTGGAGATACTACGAGGTGGACACCAAGACGTTTGAGATTATG
GACTCCCGAAACTACTATTCTCCCCTCAACGAGACGTACGACTACGACCTTGCCAAGTCC
AAGAATCACACAGTAGCCAACAACTACACTGTGGCGGTCTATGAGCCCCAGACTCCTCGG
CACTTGACCTGGAGATGGGAGTACTCTGCCCGAGACTCCTACGACTTAAACGGCACCTGG
CCTAAGGATGCTCCTCTCAACGCCACCTTTTGGCACCGAGCAGCCAAGGCGATTCTGGAA
AACCCGGAGCAGAACCAGCTGTATTGGGATCACTACTACCGAAAGTCCCCGTATACCCCA
AACGAGTGTGATCAAGAGTGTCTGCTGGATGCGTTTTGTTCGTTTGTGACGAGCTCGTTG
GATGAGAGATTTGCGTGTTTGCAGTCCAAAAATATGACTCAATTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C00979g_CDS-001

Protein length: 636 aa.
Product: Conserved hypothetical protein

>YALI0C00979g_CDS-001 MVNIVQLTTGLLAASGLAKRADNSSHQIQVPDIGNEALLEWGFQEAQKIFNTSASNCTKC
QQGINLGKYITLKAPTVTPNLMVKLCNFYKWQDDCDSYQGASITRGNQGKHLAQVFTLMD
AFGLDGQALCNGFAPLTCDRVQVPVPDLSSWWPEKPKNPKKIESSYNETFNVLHISDFHL
DLRYTPGQEAWCDDYMCCTVESHNEAAIAAGLNRTVLPAQKLGSYHCDSPEALVEDSMKS
VGAMSLARDFEFGLFTGDMVSHDLEDWLSFAHSYQSEEECYYLMKKYMGDIPVYPTFGNH
DSYPYGQVAQNSSGFAGDFSWNAELSAKMWKDFGWINETTEAQAEHTYGSFAVTTKRGLR
VISLDSNLWYSGNYYNFWNITDPDPSGLFHWLVDELLLCEKLGQKAWIMAHIPAQDLGAT
GWNSEVFRQVIRRFSPHVIAATFFGHTHADQFNLFYEKDNVWTEESALAVGWITQSVTPV
DLYNPAWRYYEVDTKTFEIMDSRNYYSPLNETYDYDLAKSKNHTVANNYTVAVYEPQTPR
HLTWRWEYSARDSYDLNGTWPKDAPLNATFWHRAAKAILENPEQNQLYWDHYYRKSPYTP
NECDQECLLDAFCSFVTSSLDERFACLQSKNMTQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG