YALI0B22858g

Overview

Description weakly similar to uniprot|P48563 Saccharomyces cerevisiae YNL297c MON2 similarity to S.pombe hypothetical protein SPAC23D3.13c
Locus type CDS
Locus tag YALI0B22858g

Location

Species Yarrowia lipolytica Positions 2999983..3003989
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 4007 (nuc.)
Previous locus YALI0B22836g Next locus YALI0B22880g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22858g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22858gYALI0B22858g_mRNA-001YALI0B22858g_CDS-001

Nucleotide sequence

 

>YALI0B22858g
ATGAATCAGCAACTGGTTGTGGAGTTGTCCAGTCTGCTTGCCGAGAGCAAGCGAAGACAC
CCTGAGCTTCGTCAGGTGAGTATCTCCAGCGTATTGACGCGAAGGAAGTGTCGGCTTCTC
TCACACGTGCCTCCCATGCGACACGGACACATGGGAAACAGACACTAACACAGGCTGCCG
AATACACACTCGATGCTGTAAAGAACAAGCAACCGCAAGACCTGAAGAAGGACGAAAAGA
TTGCCCAGCCTCTGGTGTTGGCCTGCTCGTCACGTAACGCCAAACTCACAGCAATTGCAG
TGCCATTGATACAACGACTGCTGGCTATCTCTGCGCTCTCCGACAAGTCAATTCCGTCAG
TCCTGGGTGCGTTGGAGGAGGCTACCCACTTGGGCGTCGAAATCCAGCTCAAGATCCTTC
AATGTCTCCCTACACTGATGGCAAACTACACCAAGGTGCTGCAGGGTCAGAACTTGAGCG
CCCTGTTGGCGATCTGCTCAGCCCTCAAGGCCCCCAACAAGCCCCCTGTGGTATCCAATT
CCGCAGCGGCGACACTCCAACAGTTAATAGTGTCTGTTTTCGATAAGGTGCGAGAAGAGC
AGGACCCTCCCAAGACCTTTGAGGTGCCAGTCGACACAGGAGACAAGATTCTCGTGTCTC
CTGCAGCAGATGACGCTCTATCTGTGTTGTCTGATCTCTGTTCTCTCATTGAATACCACT
CATCTACTTTCCTGAAAGGCCATTACAAGGACACTTTCTGTCTCGAACTGGTGGAGAGTA
TTCTGCAGAACCAACACATGGTGTTTGAGGAGCATCCCGAGCTCATTTACTGTGTTAAGA
TGAAGCTATTCCCAGCACTGCTTCGTGGTCTTTCTTCCGAGGCACCGTTTCCCGTGGCTG
TTAGAATCGCTCGAGTCTTGTATTTGTTGCTACGAACCCTGCTTGCGTTGGTGCCAGCTG
AGTGTGAGGTGACATTGACTCTGTTCGTCCATCTGTCAAGAGAGCCTACCGAATCATGGG
AACGTGCACTGTGCATGGAGATTCTTCAAGGTGTCTTCTCCGACTTTGACCTCCTTCTGG
CCATTTATAAGGAGTATGACGTAGCTGAGGGACGCAAGAACATTCTTGCAGATACTCTCG
GTCTGTTCCGGGACCTGCTGAAACATACCAAGGAGGGAACCAGGTTCAACAGTGCAACCA
AGACACCTTTCATTGACACACTGGACAAGACAGAAGCACCGACTCTACCCGAGGGGTACG
AGCAGTATCTTGCGATAACGTGTGCCAATTCCCTATGCGATGCGCTTGCAAAGTTCCTTC
TTCAGAAGAACCAGGACTCTCGGGCAACTCTGTGTAAGCATCTCATTGACCACTCCTGGT
CTACCATTCTGGATCTGTATAGTCCTCTGGTTTCTGGACCCTTTGAGGAGTCCCTGGATC
TTCACAGCGTTATTCGTGCTGTCCAAAAACTGGCACATGTTGCGGGATATGTGGATAGGA
AGACGGCGCGTGATGCATTCATGTCTCTTCTTGCCACAGGTGCAGAGAAACCACCCACTC
AACGGGCTATCTTGTGTCTTCGGGCTCTAGTCAACCTCGGAACCGCCCTCGGAACTACAT
TGGGCTCATCATGGAGCATTCTCCTTGATACCCTACGGGAGACTTCGCAGTCCAAGGTCG
GATCTGACCCTGCGGTGCTATCTGCAGAGAAGAAGCTGCTCGACTCGACGAAAGACTACT
CAAATTCTGCTCTTTCAGACCTTGTAAATGCATTGACTCGATCAGCTTCCGAGTGGAACA
ATGACAAGCTTGGAATTGTGGCAACTTTCAACGTCACCAAGATTGTGGAGGAAGAAGTAC
TGTGGCAGAAGCTGTTAGGTCATCTCATCTCATGTGAGAGTTTACAGTGTGCCCTCATTC
AGAGAAAACTCTCGGAATCTTCGGAGTCCGAAATACCCGAGGCTCATGCTCGAATATTTG
ATTCGCTTCTGAAGGCTGTAAAGAGCGACAAGTCGGAGATTGTCTTGGCTCATCTACAGA
CTACCCACTCGCTGCTTCAGCAACTGGGTAAGTGTTCCTCTTGGAGCACCATTTTTAGCA
TTCTGGACAGCGGTCTGAGAGATGACATGTCTCTGGAGGTCACCAAGGCCGCTTTTGACT
CAGTCAAGCTGGTCTGCAATGATTTCCTTACCCAGTTGCCTTCCGATGCTCTTCTGACAC
TCGTGGACCTACTCTACAAATTCTGTCAGCATTCTTCAGACTCCAACTTGTCATTCACAT
GCATCTCTCTGTTCTGGACTGTGTCCGACTGCATTTTGCGCCAGGCCAAGGAGACAGACG
ACATCAATCGAGTCCTTACTATGTCCGAGATGCGAGACTCTACTGAGCCTCTTGCTCTGT
GGCTCATCCTTATGTCTTCTCTGGCTCTCATGTCGCATGATTCTCGTGCTGACGTCAGAA
ATGGTGCCATCCAGACCTTCTTCCGAACTTTCGAGTCTCTCCCCAAGGACAAGCTCCAAC
CCAACCTGTGGCAGACCTTTTCCAGGGAGATTCTGCCTAAGCTCTTCTTGACACCCACAG
GAGATCTGATCGAGAATGATCCCGCCGGAGCTGCAGCAAGGTACCCTTACACGGTCTCGC
TGCTGCTTACTGGCTTCAATCACATGATGAGTGTTGTGCAGACCGTCTTGCCCGACCAGG
TTGACATTCTTTTTATCCAGCTGCTCTCCTACTTTGAGCAGCTAAACACCACAAGCCCAC
ATCCTGAGTATGCCGTAACTATCAGCAAGTCTTTCGGAGAGCTTCTGACCATTACGCCAT
TGAGCCGTGAGAGCATTGCTGCTGCATGGAAGTTCTGGCTCTCTCCTCCTTGGGGAACTG
AGTATGTCAGCCCGTGGAACCTGGGCTCTGCATCTAGTGCCATTGCTGAGCATGCATCTG
TGCACACCATTATCTACGATTTGGACAGAAATGTGCCTGATGCGACTTTGGACGCTTCCC
TGGATGTTCTTTACAACTGCCTTCTGCATCCCCAACTTCCAAAGTTCGCTCAGGACCAGA
CGTCCACCTCTCCTGTTCAGACAGCTGTGCTGAAACAAATTTCGAATGTCTCTGGCCACC
ACGCCAAGGTCTTGGAGATCCTTGGTAGGATTTCCAAGCTATCCAGCACTGCCTCCAAGG
AGGAGGATGACTCTCCCAAGTTTGGAGCTGCATCGCTGAAGGCTGTTGAGCTTTCCAGGA
GCCGACTTCCTGAAGTTCCTGAGGCTGTAGATGACAGCGTTATCTCACTGTTGCTTCAGG
ACACCACGTTGTCATCGCTTGGTAATGATGCTACGGAGCTGTTCCTGGAGACTGTTGAAA
AGGTGCTGCCTCGGTTGTCTACTGAGGAGACATTGTGGCCCCGTGTTGTCGAGGGTGGTT
TGTCCATTCTGGCTCAGCGAAGTCAGGGTTTCCATAAGTACGAGAAGCTCATTTTTCCCA
TTCTTGGACTTGACCATGTCCCTGAGTCGCTCATTGACTCCCTTCTCAAGTCCATCTATG
AGAACTCCCTGGTGTGGAAGACCAAGGCTTCTTCTCTGGGCTTCTCAGGCACTTTACAGG
CCGTGTCAAAGCCTGATTTCTCTCTCTACTGTACAACACTATTGTTCAATTTGTGGATAG
GAGAGGGGGATGGTACCGGGAGCGCTCGGGAGCGGCTCTCTCTGTCGTCGCGACAGTACG
CCATGTCTCGAGCCCAAGCATGTATCTCTCAGTTTATTAACGACTCCGTGATTCGAGGCT
CCATGCCCATTCCTAAGCTGCAGAACCAAGAGCTTCAGGTAATTCTCACGCATCTTGGTT
TGCTAGTAAAGAAGAGCCCGGATAGTAAGAAGGAGCTCAAGGCGCTGTTCCCCTTGCTGT
TGAAGCTCCAAATGCGTGGAGAGAGCACAGAAGTGATTCTACAGGAATTTTAACCACATT
AAATAAAAGTATTTAGATGAATAATGACGTACAAGTACAAGCACTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22858g_CDS-001

Protein length: 1285 aa.
Product: Conserved hypothetical protein

>YALI0B22858g_CDS-001 MNQQLVVELSSLLAESKRRHPELRQAAEYTLDAVKNKQPQDLKKDEKIAQPLVLACSSRN
AKLTAIAVPLIQRLLAISALSDKSIPSVLGALEEATHLGVEIQLKILQCLPTLMANYTKV
LQGQNLSALLAICSALKAPNKPPVVSNSAAATLQQLIVSVFDKVREEQDPPKTFEVPVDT
GDKILVSPAADDALSVLSDLCSLIEYHSSTFLKGHYKDTFCLELVESILQNQHMVFEEHP
ELIYCVKMKLFPALLRGLSSEAPFPVAVRIARVLYLLLRTLLALVPAECEVTLTLFVHLS
REPTESWERALCMEILQGVFSDFDLLLAIYKEYDVAEGRKNILADTLGLFRDLLKHTKEG
TRFNSATKTPFIDTLDKTEAPTLPEGYEQYLAITCANSLCDALAKFLLQKNQDSRATLCK
HLIDHSWSTILDLYSPLVSGPFEESLDLHSVIRAVQKLAHVAGYVDRKTARDAFMSLLAT
GAEKPPTQRAILCLRALVNLGTALGTTLGSSWSILLDTLRETSQSKVGSDPAVLSAEKKL
LDSTKDYSNSALSDLVNALTRSASEWNNDKLGIVATFNVTKIVEEEVLWQKLLGHLISCE
SLQCALIQRKLSESSESEIPEAHARIFDSLLKAVKSDKSEIVLAHLQTTHSLLQQLGKCS
SWSTIFSILDSGLRDDMSLEVTKAAFDSVKLVCNDFLTQLPSDALLTLVDLLYKFCQHSS
DSNLSFTCISLFWTVSDCILRQAKETDDINRVLTMSEMRDSTEPLALWLILMSSLALMSH
DSRADVRNGAIQTFFRTFESLPKDKLQPNLWQTFSREILPKLFLTPTGDLIENDPAGAAA
RYPYTVSLLLTGFNHMMSVVQTVLPDQVDILFIQLLSYFEQLNTTSPHPEYAVTISKSFG
ELLTITPLSRESIAAAWKFWLSPPWGTEYVSPWNLGSASSAIAEHASVHTIIYDLDRNVP
DATLDASLDVLYNCLLHPQLPKFAQDQTSTSPVQTAVLKQISNVSGHHAKVLEILGRISK
LSSTASKEEDDSPKFGAASLKAVELSRSRLPEVPEAVDDSVISLLLQDTTLSSLGNDATE
LFLETVEKVLPRLSTEETLWPRVVEGGLSILAQRSQGFHKYEKLIFPILGLDHVPESLID
SLLKSIYENSLVWKTKASSLGFSGTLQAVSKPDFSLYCTTLLFNLWIGEGDGTGSARERL
SLSSRQYAMSRAQACISQFINDSVIRGSMPIPKLQNQELQVILTHLGLLVKKSPDSKKEL
KALFPLLLKLQMRGESTEVILQEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG