YALI0B22506g

Overview

Description highly similar to uniprot|Q9Y790 Mycosphaerella graminicola NAD-dependent formate dehydrogenase
Locus type CDS
Locus tag YALI0B22506g

Location

Species Yarrowia lipolytica Positions 2962115..2963313
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1199 (nuc.)
Previous locus YALI0B22495r Next locus YALI0B22528g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22506g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22506gYALI0B22506g_mRNA-001YALI0B22506g_CDS-001

Nucleotide sequence

 

>YALI0B22506g
ATGAAGATTCTCCTTATCCTTTACGACGCCGGCTCCCACGCTGCTGACGAACCCAAGCTG
CTAGGTTGCACCGAGAACGAGCTCGGCATCCGATCCTGGCTCGAGTCCCAGGGCCATACC
CTGGTCACCACCTCTTCCAAGGAGGGTGCTGACTCTGTTCTCGACAAGGAGATTGTTGAT
GCCGATGTTGTCATCACCACTCCCTTCCACCCCGGCTACATCACCCGAGAGCGAATTGCC
AAGGCCAAGAACCTCAAGATCTGTGTCACTGCCGGTGTTGGCTCTGACCACGTTGATCTT
GCTGCCGCCAACGAGAGAAACATTGCCGTGCTCGAGGTCACTGGTTCCAACGTGACTTCT
GTTGCTGAGCACGTTGTCATGACCATGCTTGTTCTTGTCCGAAACTTCGTGCCTGCCAAC
GAGCAGGTTCGAGGCGGCGGCTGGGACGTTGCCGGTGTTGCCAAGGATTCCTACGATATT
GAGGGTAAGGTCATTGGTACCGTCGGAGTCGGCCGAATCGGCAAGCGAGTGCTCCAGCGA
CTCAAGCCCTTCGACCCCAAGGAGCTGCTCTACTACGACTATCAGCCTCTGTCTGCTGCC
GACGAGAAGGAGATTGGCGCCCGACGAGTTGAGAAGCTCGAGGACATGCTTGCCCAGTGT
GATGTTGTCACCATCAACTGCCCCCTGCACGAATCCACCAAGGGTCTCTTTAACAAGGAG
CTGCTGTCCCACATGAAGAAGGGCGCCTGGCTCGTCAACACCGCTCGAGGAGCCATCTGT
GTAAAGGAGGACGTTGCCGCCGCTCTCAAGTCTGGTCAGCTCCGAGGCTACGGCGGAGAT
GTCTGGTTCCCCCAGCCTGCCCCTGCTGACCACCCCTGGAGAAAGATGGTCAACAAGTAC
GGTGCCGGTAACGCCATGACCCCCCACATGTCTGGAACCTCTCTGGACGCCCAGGCCCGA
TACGCTGCTGGTGTCAAGCAGATTCTCGACGAGTTCTTCTCCGGCCGAGAACAGTACCGA
CCCCAGGACATTATCTGCTACGGTGGTAACTACGGCACCAAGGCCTACGGAGACGACAAG
AAGGTCGTCGACAAGAAGTAATCCGTCCAACGTTCTTCTCAGCGCACAGGTACCTATACT
ACTGGTAGTATCAGGTTAAACCTCTTTTAGTTTAATGATAAGATAAGATAACATACCGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22506g_CDS-001

Protein length: 367 aa.
Product: NAD-dependent formate dehydrogenase, putative

>YALI0B22506g_CDS-001 MKILLILYDAGSHAADEPKLLGCTENELGIRSWLESQGHTLVTTSSKEGADSVLDKEIVD
ADVVITTPFHPGYITRERIAKAKNLKICVTAGVGSDHVDLAAANERNIAVLEVTGSNVTS
VAEHVVMTMLVLVRNFVPANEQVRGGGWDVAGVAKDSYDIEGKVIGTVGVGRIGKRVLQR
LKPFDPKELLYYDYQPLSAADEKEIGARRVEKLEDMLAQCDVVTINCPLHESTKGLFNKE
LLSHMKKGAWLVNTARGAICVKEDVAAALKSGQLRGYGGDVWFPQPAPADHPWRKMVNKY
GAGNAMTPHMSGTSLDAQARYAAGVKQILDEFFSGREQYRPQDIICYGGNYGTKAYGDDK
KVVDKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG