YALI0B21692g

Overview

Description similar to uniprot|A2RA32 Aspergillus niger short- chain dehydrogenase/reductase
Locus type CDS
Locus tag YALI0B21692g

Location

Species Yarrowia lipolytica Positions 2857178..2858189
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1012 (nuc.)
Previous locus YALI0B21670g Next locus YALI0B21714g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21692g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21692gYALI0B21692g_mRNA-001YALI0B21692g_CDS-001

Nucleotide sequence

 

>YALI0B21692g
ATGCCCTCTCTAGCCGATATCAAACAGGTCAATGCGGCCTATAAGCCCACCGTTAAGGAT
GCCGTTGCCGTCTTCTTCGGCGGAACGTCCGGAATCGGAAAAGAGACCGCCTACATGTTT
GCTAAGAAGTTCGATAGCCCCACGGTGATCATTGTGGGACGAAGTGAAGAGGCAGGCAAC
AAGATTGTCAATGATCTCAAGGAGCTCAATGCAAAGGCAACCTTCATTAAGAGCGATCTG
TCGCAGATGAAGGAGGTGGTGCGAGTGTCGGACATTGTCAAGCGGGACGTGACCAAGATC
AACCTGCTGTTTCTGTCCCAGGGCATTCTGAGCACCGCTGGAAGAACTGAGACCTCGGAG
GGAATCGAGCTGCGAATGTCGCTCAACTACTACGGTCGATGGCTCGCCGTCAAGGAACTG
CTGCCTCTGGTTCAGACGGCCTACGACGAAGGAGACAAGGACAATGCACGTGTCATGACT
GTGCTGGCACCCGGAAACGAGGGTCCCTACGTGGAGGACGACATGCAGCTGCGAACTAAG
TTCTCCATGATGAACCAGAACCGTCATATTGTGCAGTTCAGCTCTGCAGCAGTCATGAAG
TTTGCTCGAGAGCATCCTGATCTGTCCTTCATTCACGCTCACCCCGGTCTCGTGGCCACT
GGAATCATGCGAGAGCTGCCCTGGTACGTCAGATACCCTTCTGCTATTCTCATGAAGACT
CCTTGGGCCGTTTCTCCTGCTGACTCTGGAGAAAAGTTCTTCTACATGAGTGCGTCTTGC
CCCAAGTTTGCCCACGGCGCCTTCCTGCTCAACCCTGCCTGTGAGTCCATCAAGGAGAAG
CCCGTCAGCAAGGGATACTTGACTGAGCAGCATCAGGACAAGATCTGGAAGCACACCGAG
GAGGAGTTCGAACTCGCTCTCAATGGTCTTAACAAGGCCTAACTTTTGAACAGTTGGACG
ATAGTGTATAGTTACGATAGTATTTATAATTGAATGAGTGTAAAATTACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21692g_CDS-001

Protein length: 314 aa.
Product: Short-chain dehydrogenase/reductase, putative

>YALI0B21692g_CDS-001 MPSLADIKQVNAAYKPTVKDAVAVFFGGTSGIGKETAYMFAKKFDSPTVIIVGRSEEAGN
KIVNDLKELNAKATFIKSDLSQMKEVVRVSDIVKRDVTKINLLFLSQGILSTAGRTETSE
GIELRMSLNYYGRWLAVKELLPLVQTAYDEGDKDNARVMTVLAPGNEGPYVEDDMQLRTK
FSMMNQNRHIVQFSSAAVMKFAREHPDLSFIHAHPGLVATGIMRELPWYVRYPSAILMKT
PWAVSPADSGEKFFYMSASCPKFAHGAFLLNPACESIKEKPVSKGYLTEQHQDKIWKHTE
EEFELALNGLNKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG