YALI0B21626g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B21626g

Location

Species Yarrowia lipolytica Positions 2844584..2848252
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 3669 (nuc.)
Previous locus YALI0B21604g Next locus YALI0B21648r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21626g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21626gYALI0B21626g_mRNA-001YALI0B21626g_CDS-001

Nucleotide sequence

 

>YALI0B21626g
ATGGGCGCCTTCCGAAACCTCTTTGCCCTCTTTAGACGAGACGACCGTCAACGGCCCAGA
GCCCCCGAGCGTGCCAAATCGTCCTCCGCACGTCTCCAATCCACCACCGCAGGGGTTTCA
GAGCTAGGAGTGTCCAAGACCCGCCCGGCTGTTCACCGAGTTCAATCTGAGTCCGTTCCC
AAGTCCAAGACCGGATCTAAACGTTTCTCTTTTAGACGCAGTGTTTCTGGTCCGTCTCCG
CCCACTACGTCTTCCTCCAGCATCGATCCCGCTCGACCTACAACCTCTCCCTCGCCTGTC
AAGTCTCCAGCAGCCGGAAACGACAGTGTTCCGAGTCTCGACTACTCGTTCGACCGCACC
TTCCAAACCATTGAGGAGGAGGAGTCGCTTGTTTCACCTGCAGTGGACACCCGCAAGTTC
AGAGAGAGTCTCAAGAAGGAGCTGCTTCTGGACCTGGACGTCTACGACTCCAAGCCGTCG
AGCAAGACTGTCACGGCCAAATCGTCACTGCTGTTCGACAGCACAGACAGACCATCTTCC
CAGCTGTTTGACGCTAGCCGCGCGTCGCAGCTATTTGACTCTAAGCTGGGTACACTTGAT
CTGTCGTTTGATTTGGATCCAGCGACGAGTCCCAATCTCAATTCCAAACTTTCACAACAC
AGCAACACCACAGTCGGATTAGGTTCAAATTCAGGAGCACCTAGCGTGCATGATTCAAGC
AGAACCCCTACCCACATTCCCCTGTTTGGATCCGACCACACGAACCCCCCAGACCACACC
AGTCCTGATCTCGCTCCTGCTCTTGACTATTTGCATTTGAACTTAGACATGGGCGCCGAC
GACACAGACACCAAGACGGTCGACTCAATCGACACCAAGACTGTCGACTCCCAGGATACT
AAAACAAGCCTAGACACAGTTCCTGACTCCCTTTCCGTCACCTCAGCAACCTCGTCTTCC
TCCAAGTCCACCAAGAACAAGAAGAAGAAGGCCAAGGCTAAGGCTAAGAAGGCCACCACG
AAATTGGAATCATCAAAACCAGCTTCACCGGAAATCGGCTCTCTGGAAGTCGATCTGGAC
GACGATGATGACGGACTCGACTTTATGGCGCAAGAGCTCGAAAACATGAAATTGGAGATG
CAGGGCAAGCGGGGCAAGCGAGAGTCTCCTGAACCGGCTGCAAAGGTTGAGGAGAAGACT
GCTGAACAGCCTACATCTACCGACTCTGCTGTGTCCATCTCAAAGAAGTCATCGGAGAAG
AAGAAGAAGAAGAAGAAGAGCAAGTCTGGCGACAAATCGGACAAATCAAGCAAATCGGAA
AAATCGGACAAACCTGATTCGACTGGATCGTCTACTGCACCAATTGATCTCACCTCGCCA
GTGGCCACGTCACCGATTGATCTCACTAGCCCAGTGGAGTCTAAACTTGAAACCATTGCT
TCCACACCTGCACTGGTGGATCAGGATGCAATTGCTCAGACTAGAGAGGTTTTACACATG
GAAGATGCCGATGGCGACAATTCCGCTAAGAAGGTTGACACTGAGCAGGTGAAGGCTTCT
CTAGTCCAGGTTGAAGATGACAACATTGGAGCCATTGAGTCTGACAAGGCAGTCAAGGTT
GACGAGGAGCAGGTCCAGCATGATCTCGTTGAGGAGAAGGAGGCGGAGAAGGAGGCGGAG
AAAGAGAAAGAGGAGGAGAAAGAGGAGGAGAAAGAGGAGGAGAAAGAGGAGGAGGAGTTT
ATTAATCCCTCAACCCCTGCCAAGGTTGTTTCTGAAAAGCCCAAGGAGGTTTCTACTCCT
TCTACTCCAGTTAAGGCAGCTACTCCAACCAAAACTGCTTCTACTCCAGTAAAGGCCTCA
GTAAAGACTCCCGCGAAGGACTCTACATCATCCACTCCTCTCAAGGGGTCTCTTGTTCAG
ACTGATGACAATGATCTTCCCGAGCCTATCCCCACTGAGTCATCCGCTCAAGACAAGACT
GCCACTCCTACTGAGTCATCTACTCCCATCAAGCAGTCGCTTGTCCAGACCGACGAGACT
CCTCTTAAGGCTGAAACTTCTGCTAGAGTGGCCTCTCCCGTTCCTGAACCTATCCCCACG
GAGCCCTCCACTCCCAAGGCTGCATCTTCCAAGTCCACCCCCATTGGCACACCCCTTTCT
TCTTCCATTACTGCATCACCCTCCAAGACCCCCACCACTGCCACCACTGTCACTACAGCG
GACGGCGAGCTGTTGATTCCTCCCCGCACGTCTTCTCTTCGACGTCCTGAGGTGGAGTTG
GCCAAGTCCAAGTCCAAGGAGGATCTGAAGAAGGAGGGTGAGCCTACAGCTGATATCAAG
AATAAGTCTGATGTTAAGGCTGAGGTTCAACCTGAAACTGAGGGACTCAAGGAAGATGTC
AAGTCTGACGTCACTTCTAAGGATGAGCCTGCAACGCAACCCGAGGCCGAGGCCAAGGAG
GCGGCAGAGGAGAAACTCAAGGCTCCCGTCAAGGTCAAGCCTGATTCTGAGCCTGCTGAG
GCAGAAGAGACTGCTACTGAGCCCAAGGAGTCGTCCCCTGAGCCCGAAGACAAGGAGAAG
GCTTCTGATGAAGCTTCCAACAAGACTTCGGTAAAGAAGGACAAGAAGAAAAAGAAGAAG
TCCACCAAGAAGGTCAAGGAGGTCAAGGAGGCGACCAAGGCGGACAAGGAGACTGCCAAC
GTGGAGTCCCGGCCTGGTGCTGTTTTAAAGGATGATATGGCCGAGTCCAAGAAGGCTGAC
ATTGACGAGAAGCCTGAGGCTGATGCTAAGGCTGAGGAGGAGGCGGAGATAGATTCCAAG
ATCGCACAGCCCACTGAAACGGATGCCGATGCTGTGGACGACAAGTTGGAGGCCAAGGGC
GAGGACAAGGAGGTGAAGGGTACCCAGCCTGTGACTGAGACTGTAGCTGAGGCTATAGCT
GAGGCTGAGACCAAGGAGCCTATTAAGACCGAGGCTGAGATCAGGGAACCTCTCGAGACT
GAGGTGGAGAAGCCTGCTGAATCGGAGAAGAAAAAGGAAGCGCCAGACTCCAAGACTGAA
TCCAAGGAGGAGTCGAAGGATGAGGCCAAGCCTGTTGAGATTCAGTCCAAGTCTGCCAAG
ACGAACGTCGAAAATGATACTAAGGACTCTGACGTCGCTGCCAATGCCATTCCCTCTCCT
GCCGCCACCGCTAGTTCTACTCCTGAACCCGAGACCAAGGAGAAGAAGAAGAAGAAGAAG
AAATCCGAGACAGGCGAGAAGACGGAGAAGACGGAAAAGAAGAAGAAGGTGGTGATGCCT
GCTGACGCGATGCTGGACGGCAAGTACTATGTCTACACTTCTTACGGTACAGGTATTCGA
GGTATTATGGCTTCCACCAATAACCTGGTGAACATTCTGGCGGCCAACGATCTAGAGCCC
CAGATTGTGGAGATCACTGTTCTTCCTCGAGCCCGACGAGTATGGCGATTCCGAGGCACA
GGCAAGGAACTTCCTGCCGTTGTCAAGGACGAGGAGGTGCTGGCAGACTACAAGGAGGTG
TGTGAGGCCAACGAGGTTGGCACTCTGGAAGATTTGTTGGAGATTGGACTTTAGACTGTG
GGATAATTTCCGGATGGGCGCCAACCGGAAAATTACACAATATATTTTATTCATTCATTA
TTTACCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21626g_CDS-001

Protein length: 1198 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B21626g_CDS-001 MGAFRNLFALFRRDDRQRPRAPERAKSSSARLQSTTAGVSELGVSKTRPAVHRVQSESVP
KSKTGSKRFSFRRSVSGPSPPTTSSSSIDPARPTTSPSPVKSPAAGNDSVPSLDYSFDRT
FQTIEEEESLVSPAVDTRKFRESLKKELLLDLDVYDSKPSSKTVTAKSSLLFDSTDRPSS
QLFDASRASQLFDSKLGTLDLSFDLDPATSPNLNSKLSQHSNTTVGLGSNSGAPSVHDSS
RTPTHIPLFGSDHTNPPDHTSPDLAPALDYLHLNLDMGADDTDTKTVDSIDTKTVDSQDT
KTSLDTVPDSLSVTSATSSSSKSTKNKKKKAKAKAKKATTKLESSKPASPEIGSLEVDLD
DDDDGLDFMAQELENMKLEMQGKRGKRESPEPAAKVEEKTAEQPTSTDSAVSISKKSSEK
KKKKKKSKSGDKSDKSSKSEKSDKPDSTGSSTAPIDLTSPVATSPIDLTSPVESKLETIA
STPALVDQDAIAQTREVLHMEDADGDNSAKKVDTEQVKASLVQVEDDNIGAIESDKAVKV
DEEQVQHDLVEEKEAEKEAEKEKEEEKEEEKEEEKEEEEFINPSTPAKVVSEKPKEVSTP
STPVKAATPTKTASTPVKASVKTPAKDSTSSTPLKGSLVQTDDNDLPEPIPTESSAQDKT
ATPTESSTPIKQSLVQTDETPLKAETSARVASPVPEPIPTEPSTPKAASSKSTPIGTPLS
SSITASPSKTPTTATTVTTADGELLIPPRTSSLRRPEVELAKSKSKEDLKKEGEPTADIK
NKSDVKAEVQPETEGLKEDVKSDVTSKDEPATQPEAEAKEAAEEKLKAPVKVKPDSEPAE
AEETATEPKESSPEPEDKEKASDEASNKTSVKKDKKKKKKSTKKVKEVKEATKADKETAN
VESRPGAVLKDDMAESKKADIDEKPEADAKAEEEAEIDSKIAQPTETDADAVDDKLEAKG
EDKEVKGTQPVTETVAEAIAEAETKEPIKTEAEIREPLETEVEKPAESEKKKEAPDSKTE
SKEESKDEAKPVEIQSKSAKTNVENDTKDSDVAANAIPSPAATASSTPEPETKEKKKKKK
KSETGEKTEKTEKKKKVVMPADAMLDGKYYVYTSYGTGIRGIMASTNNLVNILAANDLEP
QIVEITVLPRARRVWRFRGTGKELPAVVKDEEVLADYKEVCEANEVGTLEDLLEIGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG