YALI0B21450g

Overview

Description similar to uniprot|Q12127 Saccharomyces cerevisiae YLR110C (ohnolog of Scer_YGOB_YDR134C) CCW12 cell wall mannoprotein
Locus type CDS
Locus tag YALI0B21450g

Location

Species Yarrowia lipolytica Positions 2813805..2814337
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 533 (nuc.)
Previous locus YALI0B21428g Next locus YALI0B21472g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21450g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21450gYALI0B21450g_mRNA-001YALI0B21450g_CDS-001

Nucleotide sequence

 

>YALI0B21450g
ATGAAGTTCTCCGCTGTTCTCGCCGCCGCTTCTGCCGGCCTTGTCTCCGCCGCCGGTAAC
GTTACCGTTGCCCCCGTCGCCCCCGCTGCTAACGCCACCGTTACCCAGGTCGGTGTTGTC
ACCGCCAACCAGACTGTCCAGGTTACCATCACCTCTTGCAAGGATGATGCTTGCCACCAG
GCCACCGCCATCCCCACCACCGCTGTGCTGGTCCCCGTCCCCGTCACCAACGGTACTGCT
GCTGCTCCTCACAACGGAACTGCTCCTGCTCCTGCCCCTGTTCCTGCTCCTCACAACGGT
ACCCACGCCGGTAACCACACCAAGCCCCAGCCTTCTCAGGCCGAGGGCTCCCACACCGGC
ACCGTTGCTCTTGCCAACGGCGCTTCTGGCCTCGGCCTCTCTGGTGCCGCTGCTGCCATT
GCTGCCGCTGCCCTCCTCCTCTAAATGGAGCCTCTCACAATTTAATGCTTTAGATTCAAA
ATAATATAGACAATACCAACCAAAATAGAAATGATGATTATTTAACAAGGATG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0B21450g_CDS-001

Protein length: 148 aa.
Product: Cell wall mannoprotein, putative

>YALI0B21450g_CDS-001 MKFSAVLAAASAGLVSAAGNVTVAPVAPAANATVTQVGVVTANQTVQVTITSCKDDACHQ
ATAIPTTAVLVPVPVTNGTAAAPHNGTAPAPAPVPAPHNGTHAGNHTKPQPSQAEGSHTG
TVALANGASGLGLSGAAAAIAAAALLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG